[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …
wherein samples are taken from the environment via water, sediment or air from which DNA …
[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …
identification of whole communities within a targeted group) is revolutionizing the field of …
Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
Environmental RNA: a revolution in ecological resolution?
Current advancements in environmental RNA (eRNA) exploit its relatively fast turnover rate
relative to environmental DNA (eDNA) to assess 'metabolically active'or temporally/spatially …
relative to environmental DNA (eDNA) to assess 'metabolically active'or temporally/spatially …
DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers
Biodiversity assessment of marine hard-bottom communities is hindered by the high
diversity and size-ranges of the organisms present. We developed a DNA metabarcoding …
diversity and size-ranges of the organisms present. We developed a DNA metabarcoding …
Embracing environmental genomics and machine learning for routine biomonitoring
Genomics is fast becoming a routine tool in medical diagnostics and cutting-edge
biotechnologies. Yet, its use for environmental biomonitoring is still considered a futuristic …
biotechnologies. Yet, its use for environmental biomonitoring is still considered a futuristic …
Adapting metabarcoding-based benthic biomonitoring into routine marine ecological status assessment networks
The use of genomic approaches to assist with biodiversity estimations is an alternative to
traditional biomonitoring, which is very time-consuming and costly. In response to the high …
traditional biomonitoring, which is very time-consuming and costly. In response to the high …
Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
MI Brandt, B Trouche, L Quintric… - Molecular Ecology …, 2021 - Wiley Online Library
Environmental DNA metabarcoding is a powerful tool for studying biodiversity. However,
bioinformatic approaches need to adjust to the diversity of taxonomic compartments targeted …
bioinformatic approaches need to adjust to the diversity of taxonomic compartments targeted …
[HTML][HTML] Fish environmental RNA enables precise ecological surveys with high positive predictivity
K Miyata, Y Inoue, Y Amano, T Nishioka, M Yamane… - Ecological …, 2021 - Elsevier
Metabarcoding analysis using environmental DNA (eDNA) is increasingly being used for
monitoring biota. However, knowledge regarding abundance of fish environmental RNA …
monitoring biota. However, knowledge regarding abundance of fish environmental RNA …
Harnessing decay rates for coastal marine biosecurity applications: A review of environmental DNA and RNA fate
Marine nonindigenous species (NIS) are spreading at an alarming rate internationally
through anthropogenic activities such as ship** and aquaculture, affecting local …
through anthropogenic activities such as ship** and aquaculture, affecting local …