Large-scale semantic integration of linked data: A survey

M Mountantonakis, Y Tzitzikas - ACM Computing Surveys (CSUR), 2019 - dl.acm.org
A large number of published datasets (or sources) that follow Linked Data principles is
currently available and this number grows rapidly. However, the major target of Linked Data …

Knowledge graphs for the life sciences: Recent developments, challenges and opportunities

J Chen, H Dong, J Hastings, E Jiménez-Ruiz… - arxiv preprint arxiv …, 2023 - arxiv.org
The term life sciences refers to the disciplines that study living organisms and life processes,
and include chemistry, biology, medicine, and a range of other related disciplines. Research …

Toxicology knowledge graph for structural birth defects

JE Evangelista, DJB Clarke, Z **e, GB Marino… - Communications …, 2023 - nature.com
Background Birth defects are functional and structural abnormalities that impact about 1 in
33 births in the United States. They have been attributed to genetic and other factors such as …

Multiscale evolutionary perturbation attack on community detection

J Chen, Y Chen, L Chen, M Zhao… - IEEE Transactions on …, 2020 - ieeexplore.ieee.org
Community detection, aiming to group nodes based on their connections, plays an important
role in network analysis since communities, treated as meta-nodes, allow us to create a …

A more decentralized vision for linked data

A Polleres, MR Kamdar, JD Fernández… - Semantic …, 2020 - journals.sagepub.com
In this deliberately provocative position paper, we claim that more than ten years into Linked
Data there are still (too?) many unresolved challenges towards arriving at a truly machine …

Enabling web-scale data integration in biomedicine through linked open data

MR Kamdar, JD Fernández, A Polleres… - NPJ digital …, 2019 - nature.com
The biomedical data landscape is fragmented with several isolated, heterogeneous data
and knowledge sources, which use varying formats, syntaxes, schemas, and entity …

A brief survey of methods for analytics over RDF knowledge graphs

ME Papadaki, Y Tzitzikas, M Mountantonakis - Analytics, 2023 - mdpi.com
There are several Knowledge Graphs expressed in RDF (Resource Description Framework)
that aggregate/integrate data from various sources for providing unified access services and …

What are links in linked open data? A characterization and evaluation of links between knowledge graphs on the web

A Haller, JD Fernández, MR Kamdar… - Journal of Data and …, 2020 - dl.acm.org
Linked Open Data promises to provide guiding principles to publish interlinked knowledge
graphs on the Web in the form of findable, accessible, interoperable, and reusable datasets …

[HTML][HTML] Drug-drug interaction predictions via knowledge graph and text embedding: instrument validation study

M Wang, H Wang, X Liu, X Ma… - JMIR Medical …, 2021 - medinform.jmir.org
Background Minimizing adverse reactions caused by drug-drug interactions (DDIs) has
always been a prominent research topic in clinical pharmacology. Detecting all possible …

An empirical meta-analysis of the life sciences linked open data on the web

MR Kamdar, MA Musen - Scientific data, 2021 - nature.com
While the biomedical community has published several “open data” sources in the last
decade, most researchers still endure severe logistical and technical challenges to discover …