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MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomics
R Allio, A Schomaker‐Bastos… - Molecular ecology …, 2020 - Wiley Online Library
Thanks to the development of high‐throughput sequencing technologies, target enrichment
sequencing of nuclear ultraconserved DNA elements (UCEs) now allows routine inference …
sequencing of nuclear ultraconserved DNA elements (UCEs) now allows routine inference …
A plea for standardized nuclear markers in metazoan DNA taxonomy
The ease of sequencing DNA barcodes promoted a species identification system universally
applicable across animal phyla. However, relying on a single mitochondrial DNA fragment …
applicable across animal phyla. However, relying on a single mitochondrial DNA fragment …
Understanding UCEs: a comprehensive primer on using ultraconserved elements for arthropod phylogenomics
Targeted enrichment of ultraconserved elements (UCEs) has emerged as a promising tool
for inferring evolutionary history in many taxa, with utility ranging from phylogenetic and …
for inferring evolutionary history in many taxa, with utility ranging from phylogenetic and …
The coevolution of fungus-ant agriculture
Fungus-farming ants cultivate multiple lineages of fungi for food, but, because fungal cultivar
relationships are largely unresolved, the history of fungus-ant coevolution remains poorly …
relationships are largely unresolved, the history of fungus-ant coevolution remains poorly …
Standardized nuclear markers improve and homogenize species delimitation in Metazoa
Species are the fundamental units of life and evolution. Their recognition is essential for
science and society. Molecular methods have been increasingly used for the identification of …
science and society. Molecular methods have been increasingly used for the identification of …
A novel probe set for the phylogenomics and evolution of RTA spiders
J Zhang, Z Li, J Lai, Z Zhang, F Zhang - Cladistics, 2023 - Wiley Online Library
Spiders are important models for evolutionary studies of web building, sexual selection and
adaptive radiation. The recent development of probes for UCE (ultra‐conserved element) …
adaptive radiation. The recent development of probes for UCE (ultra‐conserved element) …
The molecular phylogenetics of Trachymyrmex Forel ants and their fungal cultivars provide insights into the origin and coevolutionary history of 'higher‐attine' ant …
The fungus‐growing ants and their fungal cultivars constitute a classic example of a
mutualism that has led to complex coevolutionary dynamics spanning c. 55–65 Ma. Of the …
mutualism that has led to complex coevolutionary dynamics spanning c. 55–65 Ma. Of the …
Convergent evolution of complex structures for ant–bacterial defensive symbiosis in fungus-farming ants
Evolutionary adaptations for maintaining beneficial microbes are hallmarks of mutualistic
evolution. Fungus-farming “attine” ant species have complex cuticular modifications and …
evolution. Fungus-farming “attine” ant species have complex cuticular modifications and …
Ultraconserved yet informative for species delimitation: Ultraconserved elements resolve long‐standing systematic enigma in Central European bees
Accurate and testable species hypotheses are essential for measuring, surveying and
managing biodiversity. Taxonomists often rely on mitochondrial DNA barcoding to …
managing biodiversity. Taxonomists often rely on mitochondrial DNA barcoding to …
Optimized DNA extraction and library preparation for minute arthropods: application to target enrichment in chalcid wasps used for biocontrol
A Cruaud, S Nidelet, P Arnal, A Weber… - Molecular Ecology …, 2019 - Wiley Online Library
Target enrichment is increasingly used for genoty** of plant and animal species or to
better understand the evolutionary history of important lineages through the inference of …
better understand the evolutionary history of important lineages through the inference of …