Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches

J Wiedenbeck, FM Cohan - FEMS microbiology reviews, 2011 - academic.oup.com
Horizontal genetic transfer (HGT) has played an important role in bacterial evolution at least
since the origins of the bacterial divisions, and HGT still facilitates the origins of bacterial …

Molecular ecology of microbial mats

H Bolhuis, MS Cretoiu, LJ Stal - FEMS microbiology ecology, 2014 - academic.oup.com
Phototrophic microbial mats are ideal model systems for ecological and evolutionary
analysis of highly diverse microbial communities. Microbial mats are small-scale, nearly …

Drivers sha** the diversity and biogeography of total and active bacterial communities in the South China Sea

Y Zhang, Z Zhao, M Dai, N Jiao, GJ Herndl - Molecular Ecology, 2014 - Wiley Online Library
To test the hypothesis that different drivers shape the diversity and biogeography of the total
and active bacterial community, we examined the bacterial community composition along …

Species concepts and speciation factors in cyanobacteria, with connection to the problems of diversity and classification

P Dvořák, A Poulíčková, P Hašler, M Belli… - Biodiversity and …, 2015 - Springer
The cyanobacteria are the most important prokaryotic primary producers on Earth, inhabiting
a great diversity of aquatic and terrestrial environments exposed to light. However, the …

Cyanobacteria in geothermal habitats

DM Ward, RW Castenholz, SR Miller - … of cyanobacteria II: their diversity in …, 2012 - Springer
In the last decade advances in high-throughput DNA and RNA sequencing have driven
more intensive surveys of cyanobacterial diversity in geothermal systems worldwide and the …

Fine-scale diversity and extensive recombination in a quasisexual bacterial population occupying a broad niche

MJ Rosen, M Davison, D Bhaya, DS Fisher - Science, 2015 - science.org
Extensive fine-scale genetic diversity is found in many microbial species across varied
environments, but for most, the evolutionary scenarios that generate the observed variation …

Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential

CG Klatt, JM Wood, DB Rusch, MM Bateson… - The ISME …, 2011 - academic.oup.com
Phototrophic microbial mat communities from 60° C and 65° C regions in the effluent
channels of Mushroom and Octopus Springs (Yellowstone National Park, WY, USA) were …

Environmental factors sha** the diversity of bacterial communities that promote rice production

Z Wu, Q Liu, Z Li, W Cheng, J Sun, Z Guo, Y Li, J Zhou… - BMC microbiology, 2018 - Springer
Background Exploiting soil microorganisms in the rhizosphere of plants can significantly
improve agricultural productivity; however, the mechanism by which microorganisms …

Surprisingly extensive mixed phylogenetic and ecological signals among bacterial Operational Taxonomic Units

AF Koeppel, M Wu - Nucleic acids research, 2013 - academic.oup.com
The lack of a consensus bacterial species concept greatly hampers our ability to understand
and organize bacterial diversity. Operational taxonomic units (OTUs), which are clustered on …

Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

YM Kim, S Nowack, MT Olsen, ED Becraft… - Frontiers in …, 2015 - frontiersin.org
Dynamic environmental factors such as light, nutrients, salt, and temperature continuously
affect chlorophototrophic microbial mats, requiring adaptive and acclimative responses to …