Deciphering the genetic architecture of fruit color in strawberry

B Denoyes, A Prohaska, J Petit… - Journal of Experimental …, 2023 - academic.oup.com
Fruits of Fragaria species usually have an appealing bright red color due to the
accumulation of anthocyanins, water-soluble flavonoid pigments. Octoploid cultivated …

PlantRegMap: charting functional regulatory maps in plants

F Tian, DC Yang, YQ Meng, J **… - Nucleic acids research, 2020 - academic.oup.com
With the goal of charting plant transcriptional regulatory maps (ie transcription factors (TFs),
cis-elements and interactions between them), we have upgraded the TF-centred database …

Prunus genetics and applications after de novo genome sequencing: achievements and prospects

MJ Aranzana, V Decroocq, E Dirlewanger… - Horticulture …, 2019 - academic.oup.com
Prior to the availability of whole-genome sequences, our understanding of the structural and
functional aspects of Prunus tree genomes was limited mostly to molecular genetic map** …

Bringing the animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services

ZL Hu, CA Park, JM Reecy - Nucleic acids research, 2022 - academic.oup.com
Abstract The Animal QTLdb (https://www. animalgenome. org/QTLdb) and CorrDB
(https://www. animalgenome. org/CorrDB) are unique resources for livestock animal …

m6A-Atlas v2.0: updated resources for unraveling the N6-methyladenosine (m6A) epitranscriptome among multiple species

Z Liang, H Ye, J Ma, Z Wei, Y Wang… - Nucleic Acids …, 2024 - academic.oup.com
Abstract N 6-Methyladenosine (m6A) is one of the most abundant internal chemical
modifications on eukaryote mRNA and is involved in numerous essential molecular …

Mechanism of fertilization-induced auxin synthesis in the endosperm for seed and fruit development

L Guo, X Luo, M Li, D Joldersma, M Plunkert… - Nature …, 2022 - nature.com
The dominance of flowering plants on earth is owed largely to the evolution of maternal
tissues such as fruit and seedcoat that protect and disseminate the seeds. The mechanism …

Genomic consequences of apple improvement

Z Migicovsky, KM Gardner, C Richards… - Horticulture …, 2021 - academic.oup.com
The apple (Malus domestica) is one of the world's most commercially important perennial
crops and its improvement has been the focus of human effort for thousands of years. Here …

An R2R3-MYB Transcription Factor RmMYB108 Responds to Chilling Stress of Rosa multiflora and Conferred Cold Tolerance of Arabidopsis

J Dong, L Cao, X Zhang, W Zhang, T Yang… - Frontiers in Plant …, 2021 - frontiersin.org
A sudden cooling in the early spring or late autumn negatively impacts the plant growth and
development. Although a number of studies have characterized the role of the transcription …

Phylogenomic analysis of UDP‐dependent glycosyltransferases provides insights into the evolutionary landscape of glycosylation in plant metabolism

AE Wilson, L Tian - The Plant Journal, 2019 - Wiley Online Library
Glycosylated metabolites generated by UDP‐dependent glycosyltransferases (UGTs) play
critical roles in plant interactions with the environment as well as human and animal …

Apple whole genome sequences: recent advances and new prospects

CP Peace, L Bianco, M Troggio… - Horticulture …, 2019 - academic.oup.com
In 2010, a major scientific milestone was achieved for tree fruit crops: publication of the first
draft whole genome sequence (WGS) for apple (Malus domestica). This WGS, v1. 0, was …