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Classification, evolution, and species groups within the Triatominae
CJ Schofield, C Galvão - Acta tropica, 2009 - Elsevier
Classification of the Triatominae has become a complex balance between traditional
approaches and a wide variety of evolutionary interpretations. On the one hand is the need …
approaches and a wide variety of evolutionary interpretations. On the one hand is the need …
How good are deep phylogenetic trees?
H Philippe, J Laurent - Current opinion in genetics & development, 1998 - Elsevier
Great interest is given to species emerging early in phylogenetic reconstruction because
they are often assumed to represent an ancestor. Recent studies indicate, however, that …
they are often assumed to represent an ancestor. Recent studies indicate, however, that …
ClipKIT: a multiple sequence alignment trimming software for accurate phylogenomic inference
JL Steenwyk, TJ Buida III, Y Li, XX Shen, A Rokas - PLoS biology, 2020 - journals.plos.org
Highly divergent sites in multiple sequence alignments (MSAs), which can stem from
erroneous inference of homology and saturation of substitutions, are thought to negatively …
erroneous inference of homology and saturation of substitutions, are thought to negatively …
TreeTime: Maximum-likelihood phylodynamic analysis
Mutations that accumulate in the genome of cells or viruses can be used to infer their
evolutionary history. In the case of rapidly evolving organisms, genomes can reveal their …
evolutionary history. In the case of rapidly evolving organisms, genomes can reveal their …
Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies
NA Doria-Rose, CA Schramm, J Gorman, PL Moore… - Nature, 2014 - nature.com
Antibodies capable of neutralizing HIV-1 often target variable regions 1 and 2 (V1V2) of the
HIV-1 envelope, but the mechanism of their elicitation has been unclear. Here we define the …
HIV-1 envelope, but the mechanism of their elicitation has been unclear. Here we define the …
BEAST: Bayesian evolutionary analysis by sampling trees
AJ Drummond, A Rambaut - BMC evolutionary biology, 2007 - Springer
Background The evolutionary analysis of molecular sequence variation is a statistical
enterprise. This is reflected in the increased use of probabilistic models for phylogenetic …
enterprise. This is reflected in the increased use of probabilistic models for phylogenetic …
[کتاب][B] Computational molecular evolution
Z Yang - 2006 - books.google.com
The field of molecular evolution has experienced explosive growth in recent years due to the
rapid accumulation of genetic sequence data, continuous improvements to computer …
rapid accumulation of genetic sequence data, continuous improvements to computer …
Evolution of lacewings and allied orders using anchored phylogenomics (N europtera, M egaloptera, R aphidioptera)
SL Winterton, AR Lemmon, JP Gillung… - Systematic …, 2018 - Wiley Online Library
Abstract Analysis of anchored hybrid enrichment (AHE) data under a variety of analytical
parameters for a broadly representative sample of taxa (136 species representing all extant …
parameters for a broadly representative sample of taxa (136 species representing all extant …
Watermelon origin solved with molecular phylogenetics including L innaean material: another example of museomics
G Chomicki, SS Renner - New Phytologist, 2015 - Wiley Online Library
Type specimens are permanently preserved biological specimens that fix the usage of
species names. This method became widespread from 1935 onwards and is now obligatory …
species names. This method became widespread from 1935 onwards and is now obligatory …
Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins
RP Hirt, JM Logsdon Jr, B Healy, MW Dorey… - Proceedings of the …, 1999 - pnas.org
We have determined complete gene sequences encoding the largest subunit of the RNA
polymerase II (RBP1) from two Microsporidia, Vairimorpha necatrix and Nosema locustae …
polymerase II (RBP1) from two Microsporidia, Vairimorpha necatrix and Nosema locustae …