ASAP: assemble species by automatic partitioning

N Puillandre, S Brouillet, G Achaz - Molecular Ecology …, 2021‏ - Wiley Online Library
Abstract Here, we describe Assemble Species by Automatic Partitioning (ASAP), a new
method to build species partitions from single locus sequence alignments (ie, barcode data …

iTaxoTools 0.1: Kickstarting a specimen-based software toolkit for taxonomists

M Vences, A Miralles, S Brouillet, J Ducasse… - BioRxiv, 2021‏ - biorxiv.org
While powerful and user-friendly software suites exist for phylogenetics, and an impressive
cybertaxomic infrastructure of online species databases has been set up in the past two …

DNA barcoding in species delimitation: from genetic distances to integrative taxonomy

A Miralles, N Puillandre, M Vences - DNA barcoding: methods and …, 2024‏ - Springer
Over the past two decades, DNA barcoding has become the most popular exploration
approach in molecular taxonomy, whether for identification, discovery, delimitation, or …

[HTML][HTML] DNA barcodes for accurate identification of selected medicinal plants (Caryophyllales): Toward barcoding flowering plants of the United Arab Emirates

R Jamdade, KA Mosa, A El-Keblawy, K Al Shaer… - Diversity, 2022‏ - mdpi.com
The need for herbal medicinal plants is steadily increasing. Hence, the accurate
identification of plant material has become vital for safe usage, avoiding adulteration, and …

HaplowebMaker and CoMa: two web tools to delimit species using haplowebs and conspecificity matrices

Y Spöri, JF Flot - Methods in Ecology and Evolution, 2020‏ - Wiley Online Library
Haplotype webs (haplowebs) and conspecificity matrices have recently been proposed as
graphical methods for species delimitation. However, performing such analyses by hand can …

COI-Barcoding and Species Delimitation Assessment of Toad-Headed Agamas of the Genus Phrynocephalus (Agamidae, Squamata) Reveal Unrecognized …

EN Solovyeva, EA Dunayev, RA Nazarov… - Diversity, 2023‏ - mdpi.com
We provide a diversity assessment of the agamid genus Phrynocephalus Kaup, 1825. We
analyze COI mtDNA barcodes from 385 individuals sampled all over Phrynocephalus range …

A race against extinction: The challenge to overcome the Linnean amphibian shortfall in tropical biodiversity hotspots

A Carné, DR Vieites - Diversity and Distributions, 2024‏ - Wiley Online Library
Aim There is an urgent need to explore, characterize, describe and preserve as many
species as possible to prevent their decline. Tropical biodiversity hotspots harbour most of …

Elevational diversity patterns of green lacewings (Neuroptera: Chrysopidae) uncovered with DNA barcoding in a biodiversity hotspot of Southwest China

Y Lai, Y Liu, X Liu - Frontiers in Ecology and Evolution, 2021‏ - frontiersin.org
Elevational diversity patterns can reflect the responses of biodiversity to climate change
spatially. We investigate the species diversity patterns of green lacewings (an important …

Factors affecting the accuracy of molecular delimitation in minute herbivorous mites (Acari: Eriophyoidea)

Y Yin, Y Hu, ZK Shao, LF Yao, N Li… - Zoologica …, 2023‏ - Wiley Online Library
Single‐locus molecular delimitation plays a key role in meeting the need to expedite the
exploration and description of the species on our planet. Multiple methods have been …

The prevalence of Wolbachia in multiple cockroach species and its implication for urban insect management

SO Oladipupo, Y Laidoudi, JF Beckmann… - Journal of Economic …, 2023‏ - academic.oup.com
Cockroach management relies heavily on the use of conventional insecticides in urban
settings, which no longer provide the anticipated level of control. Knowledge of cockroach …