CRISPR/Cas9 application in cancer therapy: a pioneering genome editing tool

S Shojaei Baghini, ZR Gardanova, SAH Abadi… - Cellular & Molecular …, 2022 - Springer
The progress of genetic engineering in the 1970s brought about a paradigm shift in genome
editing technology. The clustered regularly interspaced short palindromic repeats/CRISPR …

Efficient gene knockout and genetic interaction screening using the in4mer CRISPR/Cas12a multiplex knockout platform

N Esmaeili Anvar, C Lin, X Ma, LL Wilson… - Nature …, 2024 - nature.com
Genetic interactions mediate the emergence of phenotype from genotype, but technologies
for combinatorial genetic perturbation in mammalian cells are challenging to scale. Here, we …

Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors

X Feng, M Tang, M Dede, D Su, G Pei, D Jiang… - Science …, 2022 - science.org
Exploiting cancer vulnerabilities is critical for the discovery of anticancer drugs. However,
tumor suppressors cannot be directly targeted because of their loss of function. To uncover …

Regulation of leukemogenesis via redox metabolism

Z Zhang, C Chen, X Li, J Zheng, Y Zhao - Trends in Cell Biology, 2023 - cell.com
Redox metabolism plays a central role in the cellular metabolism network, involves catabolic
and anabolic reactions of diverse biomass, and determines the redox state of cells. It can be …

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity

M Golkowski, A Lius, T Sapre, HT Lau, T Moreno… - Molecular cell, 2023 - cell.com
Dynamic changes in protein-protein interaction (PPI) networks underlie all physiological
cellular functions and drive devastating human diseases. Profiling PPI networks can …

In silico RNA isoform screening to identify potential cancer driver exons with therapeutic applications

M Anglada-Girotto, L Ciampi, S Bonnal… - Nature …, 2024 - nature.com
Alternative splicing is crucial for cancer progression and can be targeted pharmacologically,
yet identifying driver exons genome-wide remains challenging. We propose identifying such …

Chromatin complex dependencies reveal targeting opportunities in leukemia

FJ Najm, P DeWeirdt, MM Moore, SM Bevill… - Nature …, 2023 - nature.com
Chromatin regulators are frequently mutated in human cancer and are attractive drug
targets. They include diverse proteins that share functional domains and assemble into …

PICKLES v3: the updated database of pooled in vitro CRISPR knockout library essentiality screens

LC Novak, J Chou, M Colic, CA Bristow… - Nucleic acids …, 2023 - academic.oup.com
Abstract PICKLES (https://pickles. hart-lab. org) is an updated web interface to a freely
available database of genome-scale CRISPR knockout fitness screens in human cell lines …

Dynamic rewiring of biological activity across genotype and lineage revealed by context-dependent functional interactions

E Kim, LC Novak, C Lin, M Colic, LL Bertolet… - Genome biology, 2022 - Springer
Background Coessentiality networks derived from CRISPR screens in cell lines provide a
powerful framework for identifying functional modules in the cell and for inferring the roles of …

High-throughput CRISPR screening in hematological neoplasms

R Ancos-Pintado, I Bragado-García, ML Morales… - Cancers, 2022 - mdpi.com
Simple Summary High-throughput CRISPR screening provides an unbiased way for
functional genomic studies in hematological malignancies. This approach has been used to …