Topological data analysis

L Wasserman - Annual Review of Statistics and Its Application, 2018 - annualreviews.org
Topological data analysis (TDA) can broadly be described as a collection of data analysis
methods that find structure in data. These methods include clustering, manifold estimation …

Is the observable Universe consistent with the cosmological principle?

PK Aluri, P Cea, P Chingangbam… - … and Quantum Gravity, 2023 - iopscience.iop.org
The cosmological principle (CP)—the notion that the Universe is spatially isotropic and
homogeneous on large scales—underlies a century of progress in cosmology. It is …

Homological scaffolds of brain functional networks

G Petri, P Expert, F Turkheimer… - Journal of The …, 2014 - royalsocietypublishing.org
Networks, as efficient representations of complex systems, have appealed to scientists for a
long time and now permeate many areas of science, including neuroimaging (Bullmore and …

Topological pattern recognition for point cloud data

G Carlsson - Acta Numerica, 2014 - cambridge.org
In this paper we discuss the adaptation of the methods of homology from algebraic topology
to the problem of pattern recognition in point cloud data sets. The method is referred to as …

Informatics and machine learning to define the phenotype

AO Basile, MDR Ritchie - Expert review of molecular diagnostics, 2018 - Taylor & Francis
Introduction: For the past decade, the focus of complex disease research has been the
genotype. From technological advancements to the development of analysis methods, great …

Topological strata of weighted complex networks

G Petri, M Scolamiero, I Donato, F Vaccarino - PloS one, 2013 - journals.plos.org
The statistical mechanical approach to complex networks is the dominant paradigm in
describing natural and societal complex systems. The study of network properties, and their …

Robust topological inference: Distance to a measure and kernel distance

B Fasy, F Lecci, L Wasserman - Journal of Machine Learning Research, 2018 - jmlr.org
Let P be a distribution with support S. The salient features of S can be quantified with
persistent homology, which summarizes topological features of the sublevel sets of the …

The topology of the cosmic web in terms of persistent Betti numbers

P Pranav, H Edelsbrunner… - Monthly Notices of …, 2017 - academic.oup.com
We introduce a multiscale topological description of the Megaparsec web-like cosmic matter
distribution. Betti numbers and topological persistence offer a powerful means of describing …

Hepatic tumor classification using texture and topology analysis of non-contrast-enhanced three-dimensional T1-weighted MR images with a radiomics approach

A Oyama, Y Hiraoka, I Obayashi, Y Saikawa, S Furui… - Scientific reports, 2019 - nature.com
The purpose of this study is to evaluate the accuracy for classification of hepatic tumors by
characterization of T1-weighted magnetic resonance (MR) images using two radiomics …

The persistence of large scale structures. Part I. Primordial non-Gaussianity

M Biagetti, A Cole, G Shiu - Journal of Cosmology and …, 2021 - iopscience.iop.org
We develop an analysis pipeline for characterizing the topology of large scale structure and
extracting cosmological constraints based on persistent homology. Persistent homology is a …