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WEGO 2.0: a web tool for analyzing and plotting GO annotations, 2018 update
J Ye, Y Zhang, H Cui, J Liu, Y Wu, Y Cheng… - Nucleic acids …, 2018 - academic.oup.com
Abstract WEGO (Web Gene Ontology Annotation Plot), created in 2006, is a simple but
useful tool for visualizing, comparing and plotting GO (Gene Ontology) annotation results …
useful tool for visualizing, comparing and plotting GO (Gene Ontology) annotation results …
[BUCH][B] Biology and evolution of the mollusca, volume 1
WF Ponder, DR Lindberg, JM Ponder - 2019 - taylorfrancis.com
Molluscs comprise the second largest phylum of animals (after arthropods), occurring in
virtually all habitats. Some are commercially important, a few are pests and some carry …
virtually all habitats. Some are commercially important, a few are pests and some carry …
Genetic adaptations of marine invertebrates to hydrothermal vent habitats
H Zhang, Y Zhou, Z Yang - Trends in Genetics, 2024 - cell.com
Hydrothermal vents are unique habitats like an oases of life compared with typical deep-sea,
soft-sediment environments. Most animals that live in these habitats are invertebrates, and …
soft-sediment environments. Most animals that live in these habitats are invertebrates, and …
Phylogeny, evolution and mitochondrial gene order rearrangement in scale worms (Aphroditiformia, Annelida)
Next-generation sequencing (NGS) has become a powerful tool in phylogenetic and
evolutionary studies. Here we applied NGS to recover two ribosomal RNA genes (18S and …
evolutionary studies. Here we applied NGS to recover two ribosomal RNA genes (18S and …
Novel perspectives of environmental proteomics
H Guo, L Wang, Y Deng, J Ye - Science of The Total Environment, 2021 - Elsevier
The connection among genome expression, proteome alteration, metabolism regulation and
phenotype change under environmental stresses is very vague. It is a tough task for the …
phenotype change under environmental stresses is very vague. It is a tough task for the …
[HTML][HTML] Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)
Abstract Aciculata (Eunicida+ Phyllodocida) is among the largest clades of annelids,
comprising almost half of the known diversity of all marine annelids. Despite the group's …
comprising almost half of the known diversity of all marine annelids. Despite the group's …
Genomic analysis of a scale worm provides insights into its adaptation to deep-sea hydrothermal vents
Deep-sea polynoid scale worms endemic to hydrothermal vents have evolved an adaptive
strategy to the chronically hypoxic environment, but its underlying molecular mechanisms …
strategy to the chronically hypoxic environment, but its underlying molecular mechanisms …
Transcriptomic analysis reveals insights into deep-sea adaptations of the dominant species, Shinkaia crosnieri (Crustacea: Decapoda: Anomura), inhabiting both …
J Cheng, M Hui, Z Sha - BMC genomics, 2019 - Springer
Background Hydrothermal vents and cold seeps are typical deep-sea chemosynthetically-
driven ecosystems that allow high abundance of specialized macro-benthos. To gather …
driven ecosystems that allow high abundance of specialized macro-benthos. To gather …
[HTML][HTML] Phylogenetics of Lepidonotopodini (Macellicephalinae, Polynoidae, Annelida) and comparative mitogenomics of shallow-water vs. deep-sea scaleworms …
Within Polynoidae, a diverse aphroditiform family, the subfamily Macellicephalinae
comprises anchialine cave-dwelling and deep-sea scaleworms. In this study …
comprises anchialine cave-dwelling and deep-sea scaleworms. In this study …
Comparative transcriptomic analysis of deep-and shallow-water barnacle species (Cirripedia, Poecilasmatidae) provides insights into deep-sea adaptation of sessile …
Z Gan, J Yuan, X Liu, D Dong, F Li, X Li - BMC genomics, 2020 - Springer
Background Barnacles are specialized marine organisms that differ from other crustaceans
in possession of a calcareous shell, which is attached to submerged surfaces. Barnacles …
in possession of a calcareous shell, which is attached to submerged surfaces. Barnacles …