[HTML][HTML] Challenges for biophysical modeling of microstructure
The biophysical modeling efforts in diffusion MRI have grown considerably over the past 25
years. In this review, we dwell on the various challenges along the journey of bringing a …
years. In this review, we dwell on the various challenges along the journey of bringing a …
Combined diffusion‐relaxometry microstructure imaging: Current status and future prospects
Microstructure imaging seeks to noninvasively measure and map microscopic tissue
features by pairing mathematical modeling with tailored MRI protocols. This article reviews …
features by pairing mathematical modeling with tailored MRI protocols. This article reviews …
Diffusion mri with machine learning
D Karimi, SK Warfield - Imaging Neuroscience, 2024 - direct.mit.edu
Diffusion-weighted magnetic resonance imaging (dMRI) of the brain offers unique
capabilities including noninvasive probing of tissue microstructure and structural …
capabilities including noninvasive probing of tissue microstructure and structural …
Robust monte-carlo simulations in diffusion-MRI: effect of the substrate complexity and parameter choice on the reproducibility of results
Monte-Carlo Diffusion Simulations (MCDS) have been used extensively as a ground truth
tool for the validation of microstructure models for Diffusion-Weighted MRI. However …
tool for the validation of microstructure models for Diffusion-Weighted MRI. However …
[HTML][HTML] MEDUSA: A GPU-based tool to create realistic phantoms of the brain microstructure using tiny spheres
K Ginsburger, F Matuschke, F Poupon, JF Mangin… - NeuroImage, 2019 - Elsevier
A GPU-based tool to generate realistic phantoms of the brain microstructure is presented.
Using a spherical meshing technique which decomposes each microstructural item into a …
Using a spherical meshing technique which decomposes each microstructural item into a …
[HTML][HTML] ConFiG: Contextual Fibre Growth to generate realistic axonal packing for diffusion MRI simulation
Abstract This paper presents Contextual Fibre Growth (ConFiG), an approach to generate
white matter numerical phantoms by mimicking natural fibre genesis. ConFiG grows fibres …
white matter numerical phantoms by mimicking natural fibre genesis. ConFiG grows fibres …
Fast multi-compartment Microstructure Fingerprinting in brain white matter
We proposed two deep neural network based methods to accelerate the estimation of
microstructural features of crossing fascicles in the white matter. Both methods focus on the …
microstructural features of crossing fascicles in the white matter. Both methods focus on the …
Metabolic activity diffusion imaging (MADI): I. Metabolic, cytometric modeling and simulations
CS Springer Jr, EM Baker, X Li, B Moloney… - NMR in …, 2023 - Wiley Online Library
Evidence mounts that the steady‐state cellular water efflux (unidirectional) first‐order rate
constant (kio [s− 1]) magnitude reflects the ongoing, cellular metabolic rate of the cytolemmal …
constant (kio [s− 1]) magnitude reflects the ongoing, cellular metabolic rate of the cytolemmal …
A simulation-driven supervised learning framework to estimate brain microstructure using diffusion MRI
We propose a framework to train supervised learning models on synthetic data to estimate
brain microstructure parameters using diffusion magnetic resonance imaging (dMRI) …
brain microstructure parameters using diffusion magnetic resonance imaging (dMRI) …
Myelin plasticity during early literacy training in at-risk pre-readers
A growing body of neuroimaging evidence shows that white matter can change as a result of
experience and structured learning. Although the majority of previous work has used …
experience and structured learning. Although the majority of previous work has used …