Non-coding driver mutations in human cancer
Tumour formation involves random mutagenic events and positive evolutionary selection
acting on a subset of such events, referred to as driver mutations. A decade of careful …
acting on a subset of such events, referred to as driver mutations. A decade of careful …
Oncogenic enhancers in leukemia
R Mulet-Lazaro, R Delwel - Blood Cancer Discovery, 2024 - aacrjournals.org
Although the study of leukemogenesis has traditionally focused on protein-coding genes,
the role of enhancer dysregulation is becoming increasingly recognized. The advent of high …
the role of enhancer dysregulation is becoming increasingly recognized. The advent of high …
Silencing of LINE-1 retrotransposons is a selective dependency of myeloid leukemia
Transposable elements or transposons are major players in genetic variability and genome
evolution. Aberrant activation of long interspersed element-1 (LINE-1 or L1) …
evolution. Aberrant activation of long interspersed element-1 (LINE-1 or L1) …
A glutamine metabolic switch supports erythropoiesis
Metabolic requirements vary during development, and our understanding of how metabolic
activity influences cell specialization is incomplete. Here, we describe a switch from …
activity influences cell specialization is incomplete. Here, we describe a switch from …
Convergent epigenetic evolution drives relapse in acute myeloid leukemia
Relapse of acute myeloid leukemia (AML) is highly aggressive and often treatment
refractory. We analyzed previously published AML relapse cohorts and found that 40% of …
refractory. We analyzed previously published AML relapse cohorts and found that 40% of …
Landscape of enhancer disruption and functional screen in melanoma cells
Z Wang, M Luo, Q Liang, K Zhao, Y Hu, W Wang… - Genome Biology, 2023 - Springer
Background The high mutation rate throughout the entire melanoma genome presents a
major challenge in stratifying true driver events from the background mutations. Numerous …
major challenge in stratifying true driver events from the background mutations. Numerous …
Pan-cancer assessment of mutational landscape in intrinsically disordered hotspots reveals potential driver genes
H Zou, T Pan, Y Gao, R Chen, S Li, J Guo… - Nucleic acids …, 2022 - academic.oup.com
Large-scale cancer genome sequencing has enabled the catalogs of somatic mutations;
however, the mutational impact on intrinsically disordered protein regions (IDRs) has not …
however, the mutational impact on intrinsically disordered protein regions (IDRs) has not …
Comprehensive characterization of somatic variants associated with intronic polyadenylation in human cancers
Somatic single nucleotide variants (SNVs) in cancer genome affect gene expression through
various mechanisms depending on their genomic location. While somatic SNVs near …
various mechanisms depending on their genomic location. While somatic SNVs near …
Disabling uncompetitive inhibition of oncogenic IDH mutations drives acquired resistance
Mutations in IDH genes occur frequently in acute myeloid leukemia (AML) and other human
cancers to generate the oncometabolite R-2HG. Allosteric inhibition of mutant IDH …
cancers to generate the oncometabolite R-2HG. Allosteric inhibition of mutant IDH …
A primary hierarchically organized patient-derived model enables in depth interrogation of stemness driven by the coding and non-coding genome
H Boutzen, SA Madani Tonekaboni, M Chan-Seng-Yue… - Leukemia, 2022 - nature.com
Many cancers are organized as cellular hierarchies sustained by cancer stem cells (CSC),
whose eradication is crucial for achieving long-term remission. Difficulties to isolate and …
whose eradication is crucial for achieving long-term remission. Difficulties to isolate and …