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A primer to directed evolution: current methodologies and future directions
Directed evolution is one of the most powerful tools for protein engineering and functions by
harnessing natural evolution, but on a shorter timescale. It enables the rapid selection of …
harnessing natural evolution, but on a shorter timescale. It enables the rapid selection of …
Thermal stability enhancement: Fundamental concepts of protein engineering strategies to manipulate the flexible structure
Increasing the temperature by just a few degrees may lead to structural perturbation or
unfolding of the protein and consequent loss of function. The concepts of flexibility and …
unfolding of the protein and consequent loss of function. The concepts of flexibility and …
Expanding functional protein sequence spaces using generative adversarial networks
D Repecka, V Jauniskis, L Karpus… - Nature Machine …, 2021 - nature.com
De novo protein design for catalysis of any desired chemical reaction is a long-standing goal
in protein engineering because of the broad spectrum of technological, scientific and …
in protein engineering because of the broad spectrum of technological, scientific and …
Emergence of a catalytic tetrad during evolution of a highly active artificial aldolase
R Obexer, A Godina, X Garrabou, PRE Mittl, D Baker… - Nature …, 2017 - nature.com
Designing catalysts that achieve the rates and selectivities of natural enzymes is a long-
standing goal in protein chemistry. Here, we show that an ultrahigh-throughput droplet …
standing goal in protein chemistry. Here, we show that an ultrahigh-throughput droplet …
Exploring protein fitness landscapes by directed evolution
Directed evolution circumvents our profound ignorance of how a protein's sequence
encodes its function by using iterative rounds of random mutation and artificial selection to …
encodes its function by using iterative rounds of random mutation and artificial selection to …
Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently
The amino acid sequence of a protein affects both its structure and its function. Thus, the
ability to modify the sequence, and hence the structure and activity, of individual proteins in …
ability to modify the sequence, and hence the structure and activity, of individual proteins in …
Nucleic acid-guided nucleases
2017-08-22 Assigned to MUSE BIOTECHNOLOGY, INC. reassignment MUSE
BIOTECHNOLOGY, INC. ASSIGNMENT OF ASSIGNORS INTEREST (SEE DOCUMENT …
BIOTECHNOLOGY, INC. ASSIGNMENT OF ASSIGNORS INTEREST (SEE DOCUMENT …
Reducing codon redundancy and screening effort of combinatorial protein libraries created by saturation mutagenesis
Saturation mutagenesis probes define sections of the vast protein sequence space.
However, even if randomization is limited this way, the combinatorial numbers problem is …
However, even if randomization is limited this way, the combinatorial numbers problem is …
Increasing the activity of immobilized enzymes with nanoparticle conjugation
Highlights•Enzyme activity/stability can be improved upon immobilization on nanoparticles
(NPs).•Five underlying physicochemical mechanisms describe enzyme–NP activity.•Carbon …
(NPs).•Five underlying physicochemical mechanisms describe enzyme–NP activity.•Carbon …
Methods for generating barcoded combinatorial libraries
2018-02-08 Assigned to THE REGENTS OF THE UNIVERSITY OF COLORADO, A BODY
CORPORATE reassignment THE REGENTS OF THE UNIVERSITY OF COLORADO, A …
CORPORATE reassignment THE REGENTS OF THE UNIVERSITY OF COLORADO, A …