Quantitative mass spectrometry-based proteomics: an overview

S Rozanova, K Barkovits, M Nikolov, C Schmidt… - Quantitative methods in …, 2021 - Springer
In recent decades, mass spectrometry has moved more than ever before into the front line of
protein-centered research. After being established at the qualitative level, the more …

Proteomic landscape of Alzheimer's Disease: novel insights into pathogenesis and biomarker discovery

B Bai, D Vanderwall, Y Li, X Wang, S Poudel… - Molecular …, 2021 - Springer
Mass spectrometry-based proteomics empowers deep profiling of proteome and protein
posttranslational modifications (PTMs) in Alzheimer's disease (AD). Here we review the …

A review on quantitative multiplexed proteomics

N Pappireddi, L Martin, M Wühr - Chembiochem, 2019 - Wiley Online Library
Over the last few decades, mass spectrometry‐based proteomics has become an
increasingly powerful tool that is now able to routinely detect and quantify thousands of …

Quantitative proteomics using isobaric labeling: a practical guide

X Chen, Y Sun, T Zhang, L Shu… - Genomics …, 2021 - academic.oup.com
In the past decade, relative proteomic quantification using isobaric labeling technology has
developed into a key tool for comparing the expression of proteins in biological samples …

Recent advances in isobaric labeling and applications in quantitative proteomics

MK Sivanich, TJ Gu, DN Tabang, L Li - Proteomics, 2022 - Wiley Online Library
Mass spectrometry (MS) has emerged at the forefront of quantitative proteomic techniques.
Liquid chromatography‐mass spectrometry (LC‐MS) can be used to determine abundances …

Advances and perspectives in chemical isotope labeling-based mass spectrometry methods for metabolome and exposome analysis

S Gao, X Zhou, M Yue, S Zhu, Q Liu, XE Zhao - TrAC Trends in Analytical …, 2023 - Elsevier
Metabolomics and exposomics are important in the studies of human health and diseases.
Chemical isotope labeling (CIL) combined with mass spectrometry (MS) can not only …

Relative and absolute quantitation in mass spectrometry–based proteomics

JA Ankney, A Muneer, X Chen - Annual review of analytical …, 2018 - annualreviews.org
Mass spectrometry–based quantitative proteomics is a powerful tool for gaining insights into
function and dynamics of biological systems. However, peptides with different sequences …

27-Plex tandem mass tag mass spectrometry for profiling brain proteome in Alzheimer's disease

Z Wang, K Yu, H Tan, Z Wu, JH Cho, X Han… - Analytical …, 2020 - ACS Publications
Multiplexed isobaric labeling methods, such as tandem mass tags (TMT), remarkably
improve the throughput of quantitative mass spectrometry. Here, we present a 27-plex TMT …

In-depth site-specific analysis of N-glycoproteome in human cerebrospinal fluid and glycosylation landscape changes in Alzheimer's disease

Z Chen, Q Yu, Q Yu, J Johnson, R Shipman… - Molecular & Cellular …, 2021 - ASBMB
As the body fluid that directly interchanges with the extracellular fluid of the central nervous
system (CNS), cerebrospinal fluid (CSF) serves as a rich source for CNS-related disease …

HyperSCP: Combining isotopic and isobaric labeling for higher throughput single-cell proteomics

Y Liang, T Truong, AJ Saxton, H Boekweg… - Analytical …, 2023 - ACS Publications
Recent developments in mass spectrometry-based single-cell proteomics (SCP) have
resulted in dramatically improved sensitivity, yet the relatively low measurement throughput …