Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy

WB Dunn, DI Broadhurst, HJ Atherton… - Chemical society …, 2011 - pubs.rsc.org
The study of biological systems in a holistic manner (systems biology) is increasingly being
viewed as a necessity to provide qualitative and quantitative descriptions of the emergent …

Breeding crop plants with deep roots: their role in sustainable carbon, nutrient and water sequestration

DB Kell - Annals of botany, 2011 - academic.oup.com
Background The soil represents a reservoir that contains at least twice as much carbon as
does the atmosphere, yet (apart from 'root crops') mainly just the above-ground plant …

Proposed minimum reporting standards for chemical analysis: chemical analysis working group (CAWG) metabolomics standards initiative (MSI)

LW Sumner, A Amberg, D Barrett, MH Beale, R Beger… - Metabolomics, 2007 - Springer
There is a general consensus that supports the need for standardized reporting of metadata
or information describing large-scale metabolomics and other functional genomics data sets …

Gas chromatography mass spectrometry–based metabolite profiling in plants

J Lisec, N Schauer, J Kopka, L Willmitzer, AR Fernie - Nature protocols, 2006 - nature.com
The concept of metabolite profiling has been around for decades, but technical innovations
are now enabling it to be carried out on a large scale with respect to the number of both …

Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts

O Beckonert, HC Keun, TMD Ebbels, J Bundy… - Nature protocols, 2007 - nature.com
Metabolic profiling, metabolomic and metabonomic studies mainly involve the
multicomponent analysis of biological fluids, tissue and cell extracts using NMR …

GMD@ CSB. DB: the Golm metabolome database

J Kopka, N Schauer, S Krueger, C Birkemeyer… - …, 2005 - academic.oup.com
Metabolomics, in particular gas chromatography–mass spectrometry (GC–MS) based
metabolite profiling of biological extracts, is rapidly becoming one of the cornerstones of …

Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry

RCH De Vos, S Moco, A Lommen, JJB Keurentjes… - Nature protocols, 2007 - nature.com
Untargeted metabolomics aims to gather information on as many metabolites as possible in
biological systems by taking into account all information present in the data sets. Here we …

Marker-assisted plant breeding: principles and practices

BD Singh, AK Singh - 2015 - Springer
Improved genotypes developed by plant breeding remain pivotal to global food security. In
the wake of ever-increasing human population, declining agricultural resources and the …

The future of biocuration

D Howe, M Costanzo, P Fey, T Gojobori, L Hannick… - Nature, 2008 - nature.com
The future of biocuration | Nature Skip to main content Thank you for visiting nature.com. You
are using a browser version with limited support for CSS. To obtain the best experience, we …

Ensuring fact-based metabolite identification in liquid chromatography–mass spectrometry-based metabolomics

G Theodoridis, H Gika, D Raftery, R Goodacre… - Analytical …, 2023 - ACS Publications
Metabolite identification represents a major bottleneck in contemporary metabolomics
research and a step where critical errors may occur and pass unnoticed. This is especially …