Isobaric labeling-based relative quantification in shotgun proteomics

N Rauniyar, JR Yates III - Journal of proteome research, 2014 - ACS Publications
Mass spectrometry plays a key role in relative quantitative comparisons of proteins in order
to understand their functional role in biological systems upon perturbation. In this review, we …

Multi-dimensional liquid chromatography in proteomics—a review

X Zhang, A Fang, CP Riley, M Wang, FE Regnier… - Analytica chimica …, 2010 - Elsevier
Proteomics is the large-scale study of proteins, particularly their expression, structures and
functions. This still-emerging combination of technologies aims to describe and characterize …

Simultaneous analysis of relative protein expression levels across multiple samples using iTRAQ isobaric tags with 2D nano LC–MS/MS

RD Unwin, JR Griffiths, AD Whetton - Nature protocols, 2010 - nature.com
In this paper, we describe the use of iTRAQ (isobaric Tags for Relative and Absolute
Quantitation) tags for comparison of protein expression levels between multiple samples …

Discovery of novel bladder cancer biomarkers by comparative urine proteomics using iTRAQ technology

YT Chen, CL Chen, HW Chen, T Chung… - Journal of proteome …, 2010 - ACS Publications
A urine sample preparation workflow for the iTRAQ (isobaric tag for relative and absolute
quantitation) technique was established. The reproducibility of this platform was evaluated …

Quantitative proteomic profiling of prostate cancer reveals a role for miR-128 in prostate cancer

AP Khan, LM Poisson, VB Bhat, D Fermin… - Molecular & Cellular …, 2010 - ASBMB
Multiple, complex molecular events characterize cancer development and progression.
Deciphering the molecular networks that distinguish organ-confined disease from metastatic …

[HTML][HTML] Prostate cancer proteomics: Current trends and future perspectives for biomarker discovery

CP Tanase, E Codrici, ID Popescu, S Mihai, AM Enciu… - Oncotarget, 2017 - ncbi.nlm.nih.gov
The clinical and fundamental research in prostate cancer-the most common urological
cancer in men-is currently entering the proteomic and genomic era. The focus has switched …

Biomarker discovery in low-grade breast cancer using isobaric stable isotope tags and two-dimensional liquid chromatography-tandem mass spectrometry (iTRAQ …

P Bouchal, T Roumeliotis, R Hrstka… - Journal of proteome …, 2009 - ACS Publications
The present pilot study constitutes a proof-of-principle in the use of a quantitative LC-MS/MS
based proteomic method for the comparative analysis of representative low-grade breast …

10 years of MS instrumental developments–impact on LC–MS/MS in clinical chemistry

M Himmelsbach - Journal of Chromatography B, 2012 - Elsevier
The combination of liquid chromatography and mass spectrometry (LC–MS) is a powerful
and indispensable analytical tool that is widely applied in many areas of chemistry …

Tissue proteomics for the next decade? Towards a molecular dimension in histology

R Longuespée, M Fléron, C Pottier… - OMICS: A Journal of …, 2014 - liebertpub.com
The concept of tissues appeared more than 200 years ago, since textures and attendant
differences were described within the whole organism components. Instrumental …

Multidimensional chromatography coupled to mass spectrometry in analysing complex proteomics samples

P Horvatovich, B Hoekman… - Journal of separation …, 2010 - Wiley Online Library
Multidimensional chromatography coupled to mass spectrometry (LCn‐MS) provides more
separation power and an extended measured dynamic concentration range to analyse …