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The future of parentage analysis: From microsatellites to SNPs and beyond
SP Flanagan, AG Jones - Molecular ecology, 2019 - Wiley Online Library
Parentage analysis is a cornerstone of molecular ecology that has delivered fundamental
insights into behaviour, ecology and evolution. Microsatellite markers have long been the …
insights into behaviour, ecology and evolution. Microsatellite markers have long been the …
Functional mechanisms of microsatellite DNA in eukaryotic genomes
ATM Bagshaw - Genome biology and evolution, 2017 - academic.oup.com
Microsatellite repeat DNA is best known for its length mutability, which is implicated in
several neurological diseases and cancers, and often exploited as a genetic marker. Less …
several neurological diseases and cancers, and often exploited as a genetic marker. Less …
Genome-wide simple sequence repeats (SSR) markers discovered from whole-genome sequence comparisons of multiple spinach accessions
The availability of well-assembled genome sequences and reduced sequencing costs have
enabled the resequencing of many additional accessions in several crops, thus facilitating …
enabled the resequencing of many additional accessions in several crops, thus facilitating …
Adding loci improves phylogeographic resolution in red mangroves despite increased missing data: comparing microsatellites and RAD-Seq and investigating loci …
The widespread adoption of RAD-Seq data in phylogeography means genealogical
relationships previously evaluated using relatively few genetic markers can now be …
relationships previously evaluated using relatively few genetic markers can now be …
A user guide to the Brassica 60K Illumina Infinium™ SNP genoty** array
Abstract The Brassica napus 60K Illumina Infinium™ SNP array has had huge international
uptake in the rapeseed community due to the revolutionary speed of acquisition and ease of …
uptake in the rapeseed community due to the revolutionary speed of acquisition and ease of …
Tracking population genetic signatures of local extinction with herbarium specimens
C Rosche, A Baasch, K Runge, P Brade… - Annals of …, 2022 - academic.oup.com
Abstract Background and Aims Habitat degradation and landscape fragmentation
dramatically lower population sizes of rare plant species. Decreasing population sizes may …
dramatically lower population sizes of rare plant species. Decreasing population sizes may …
Inferring genetic structure when there is little: population genetics versus genomics of the threatened bat Miniopterus schreibersii across Europe
Despite their paramount importance in molecular ecology and conservation, genetic
diversity and structure remain challenging to quantify with traditional genoty** methods …
diversity and structure remain challenging to quantify with traditional genoty** methods …
Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
C Montagnon, A Mahyoub, W Solano… - Genetic Resources and …, 2021 - Springer
Whilst it is established that almost all cultivated coffee (Coffea arabica L.) varieties originated
in Yemen after some coffee seeds were introduced into Yemen from neighboring Ethiopia …
in Yemen after some coffee seeds were introduced into Yemen from neighboring Ethiopia …
Unravelling the genetic diversity and population structure of common walnut in the Iranian Plateau
Abstract Background Common walnut (Juglans regia L.) has a long cultivation history, given
its highly valuable wood and rich nutritious nuts. The Iranian Plateau has been considered …
its highly valuable wood and rich nutritious nuts. The Iranian Plateau has been considered …
SSR‐seq: Genoty** of microsatellites using next‐generation sequencing reveals higher level of polymorphism as compared to traditional fragment size scoring
P Šarhanová, S Pfanzelt, R Brandt… - Ecology and …, 2018 - Wiley Online Library
Microsatellites (or simple sequence repeats, SSR) are widely used markers in population
genetics. Traditionally, genoty** was and still is carried out through recording fragment …
genetics. Traditionally, genoty** was and still is carried out through recording fragment …