The future of parentage analysis: From microsatellites to SNPs and beyond

SP Flanagan, AG Jones - Molecular ecology, 2019 - Wiley Online Library
Parentage analysis is a cornerstone of molecular ecology that has delivered fundamental
insights into behaviour, ecology and evolution. Microsatellite markers have long been the …

Functional mechanisms of microsatellite DNA in eukaryotic genomes

ATM Bagshaw - Genome biology and evolution, 2017 - academic.oup.com
Microsatellite repeat DNA is best known for its length mutability, which is implicated in
several neurological diseases and cancers, and often exploited as a genetic marker. Less …

Genome-wide simple sequence repeats (SSR) markers discovered from whole-genome sequence comparisons of multiple spinach accessions

G Bhattarai, A Shi, DR Kandel, N Solís-Gracia… - Scientific reports, 2021 - nature.com
The availability of well-assembled genome sequences and reduced sequencing costs have
enabled the resequencing of many additional accessions in several crops, thus facilitating …

A user guide to the Brassica 60K Illumina Infinium™ SNP genoty** array

AS Mason, EE Higgins, RJ Snowdon, J Batley… - Theoretical and Applied …, 2017 - Springer
Abstract The Brassica napus 60K Illumina Infinium™ SNP array has had huge international
uptake in the rapeseed community due to the revolutionary speed of acquisition and ease of …

Tracking population genetic signatures of local extinction with herbarium specimens

C Rosche, A Baasch, K Runge, P Brade… - Annals of …, 2022 - academic.oup.com
Abstract Background and Aims Habitat degradation and landscape fragmentation
dramatically lower population sizes of rare plant species. Decreasing population sizes may …

Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen

C Montagnon, A Mahyoub, W Solano… - Genetic Resources and …, 2021 - Springer
Whilst it is established that almost all cultivated coffee (Coffea arabica L.) varieties originated
in Yemen after some coffee seeds were introduced into Yemen from neighboring Ethiopia …

Unravelling the genetic diversity and population structure of common walnut in the Iranian Plateau

R Shahi Shavvon, HL Qi, M Mafakheri, PZ Fan… - BMC Plant …, 2023 - Springer
Abstract Background Common walnut (Juglans regia L.) has a long cultivation history, given
its highly valuable wood and rich nutritious nuts. The Iranian Plateau has been considered …