Progress toward single cell metabolomics

SS Rubakhin, EJ Lanni, JV Sweedler - Current opinion in biotechnology, 2013 - Elsevier
The metabolome refers to the entire set of small molecules, or metabolites, within a
biological sample. These molecules are involved in many fundamental intracellular …

Single-molecule imaging and tracking of molecular dynamics in living cells

N Li, R Zhao, Y Sun, Z Ye, K He… - National Science …, 2017 - academic.oup.com
Unlike the ensemble-averaging measurements, the single-molecule imaging and tracking
(SMIT) in living cells provides the real-time quantitative information about the locations …

Quantitative live-cell imaging reveals spatio-temporal dynamics and cytoplasmic assembly of the 26S proteasome

CG Pack, H Yukii, A Toh-e, T Kudo, H Tsuchiya… - Nature …, 2014 - nature.com
The 26S proteasome is a 2.5-MDa multisubunit protease complex that degrades
polyubiquitylated proteins. Although its functions and structure have been extensively …

Influence of Chemical and Genetic Manipulations on Cellular Organelles Quantified by Label-Free Optical Diffraction Tomography

MJ Cho, CE Kim, YH Shin, JK Kim… - Analytical Chemistry, 2023 - ACS Publications
Label-free optical diffraction tomography provides three-dimensional imaging of cells and
organelles, along with their refractive index (RI) and volume. These physical parameters are …

Single-molecule analysis of cell surface dynamics in Caenorhabditis elegans embryos

FB Robin, WM McFadden, B Yao, EM Munro - Nature methods, 2014 - nature.com
We describe a general, versatile and minimally invasive method to image single molecules
near the cell surface that can be applied to any GFP-tagged protein in Caenorhabditis …

Electronic tuning of self-healing fluorophores for live-cell and single-molecule imaging

Q Zheng, S Jockusch, Z Zhou, RB Altman, H Zhao… - Chemical …, 2017 - pubs.rsc.org
Bright, long-lasting organic fluorophores enable a broad range of imaging applications.“Self-
healing” fluorophores, in which intra-molecularly linked protective agents quench photo …

Single-molecule imaging of protein interactions and dynamics

F Luo, G Qin, T **a, X Fang - Annual Review of Analytical …, 2020 - annualreviews.org
Live-cell single-molecule fluorescence imaging has become a powerful analytical tool to
investigate cellular processes that are not accessible to conventional biochemical …

Single-molecule imaging in vivo: the dancing building blocks of the cell

M Coelho, N Maghelli, IM Tolić-Nørrelykke - Integrative Biology, 2013 - academic.oup.com
A cell can be viewed as a dynamic puzzle, where single pieces shuffle in space, change
their conformation to fit different partners, and new pieces are generated while old ones are …

Dynamically varying interactions between heregulin and ErbB proteins detected by single-molecule analysis in living cells

M Hiroshima, Y Saeki… - Proceedings of the …, 2012 - National Acad Sciences
Heregulin (HRG) belongs to the family of EGFs and activates the receptor proteins ErbB3
and ErbB4 in a variety of cell types to regulate cell fate. The interactions between HRG and …

Mechanochemical modeling of neutrophil migration based on four signaling layers, integrin dynamics, and substrate stiffness

S Feng, L Zhou, Y Zhang, S Lü, M Long - Biomechanics and Modeling in …, 2018 - Springer
Directional neutrophil migration during human immune responses is a highly coordinated
process regulated by both biochemical and biomechanical environments. In this paper, we …