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Accurate prediction of quantitative traits with failed SNP calls in canola and maize
In modern plant breeding, genomic selection is becoming the gold standard to select
superior genotypes in large breeding populations that are only partially phenotyped. Many …
superior genotypes in large breeding populations that are only partially phenotyped. Many …
Use of continuous genotypes for genomic prediction in sugarcane
Genomic selection in sugarcane faces challenges due to limited genomic tools and high
genomic complexity, particularly because of its high and variable ploidy. The classification of …
genomic complexity, particularly because of its high and variable ploidy. The classification of …
Identifying the physiological traits associated with DNA marker using genome wide association in wheat under heat stress
Heat stress poses a significant environmental challenge that profoundly impacts wheat
productivity. It disrupts vital physiological processes such as photosynthesis, by impeding …
productivity. It disrupts vital physiological processes such as photosynthesis, by impeding …
A high-density integrated map for grapevine based on three map** populations genotyped by the Vitis18K SNP chip
Key message We present a high-density integrated map for grapevine, allowing refinement
and improved understanding of the grapevine genome, while demonstrating the applicability …
and improved understanding of the grapevine genome, while demonstrating the applicability …
Optimising clonal performance in sugarcane: leveraging non-additive effects via mate-allocation strategies
Mate-allocation strategies in breeding programs can improve progeny performance by
harnessing non-additive genetic effects. These approaches prioritise predicted progeny …
harnessing non-additive genetic effects. These approaches prioritise predicted progeny …
How to handle high subgenome sequence similarity in allopolyploid Fragaria x ananassa: linkage disequilibrium based variant filtering
Abstract Background The allo-octoploid Fragaria x ananassa follows disomic inheritance,
yet the high sequence similarity among its subgenomes can lead to misalignment of short …
yet the high sequence similarity among its subgenomes can lead to misalignment of short …
Develo** core marker sets for effective genomic-assisted selection in wheat and barley breeding programs
G Ishikawa, H Sakai, N Mizuno, E Solovieva… - Breeding …, 2022 - jstage.jst.go.jp
Wheat (Triticum aestivum L.) and barley (Hordeum vulgare L.) are widely cultivated
temperate crops. In breeding programs with these crops in Japan, effective genomic …
temperate crops. In breeding programs with these crops in Japan, effective genomic …
Reassessing the genetic variability of Tectona grandis through high-throughput genoty**: Insights on its narrow genetic base
Teak (Tectona grandis Linn. f.) is considered one of the most expensive hardwoods in the
world. The dispersion of the species over the years has taken the teak beyond its first …
world. The dispersion of the species over the years has taken the teak beyond its first …
Genome properties of key oil palm (Elaeis guineensis Jacq.) breeding populations
A good knowledge of the genome properties of the populations makes it possible to optimize
breeding methods, in particular genomic selection (GS). In oil palm (Elaeis guineensis …
breeding methods, in particular genomic selection (GS). In oil palm (Elaeis guineensis …
Genomic mate-allocation strategies exploiting additive and non-additive genetic effects to maximise total clonal performance in sugarcane
Mate-allocation in breeding programs can improve progeny performance by exploiting non-
additive effects. Breeding decisions in the mate-allocation approach are based on predicted …
additive effects. Breeding decisions in the mate-allocation approach are based on predicted …