From integrative taxonomy to species description: one step beyond

E Pante, C Schoelinck, N Puillandre - Systematic Biology, 2015 - academic.oup.com
MATERIALS AND METHODS We performed a literature survey using the Web of Science
research tool, limited to the scientific articles published between 2006 and 2013, and using …

iTaxoTools 0.1: Kickstarting a specimen-based software toolkit for taxonomists

M Vences, A Miralles, S Brouillet, J Ducasse… - BioRxiv, 2021 - biorxiv.org
While powerful and user-friendly software suites exist for phylogenetics, and an impressive
cybertaxomic infrastructure of online species databases has been set up in the past two …

Looking back on a decade of barcoding crustaceans

MJ Raupach, AE Radulovici - ZooKeys, 2015 - pmc.ncbi.nlm.nih.gov
Species identification represents a pivotal component for large-scale biodiversity studies
and conservation planning but represents a challenge for many taxa when using …

Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing

A Srivathsan, E Hartop, J Puniamoorthy, WT Lee… - BMC biology, 2019 - Springer
Background More than 80% of all animal species remain unknown to science. Most of these
species live in the tropics and belong to animal taxa that combine small body size with high …

The application of “-omics” technologies for the classification and identification of animals

MJ Raupach, R Amann, QD Wheeler… - Organisms Diversity & …, 2016 - Springer
The correct classification of organisms based on specific rules is essential in biological
sciences. Traditionally, morphological characteristics such as size, shape, color, and …

A DNA 'Barcode Blitz': Rapid digitization and sequencing of a natural history collection

PDN Hebert, JR Dewaard, EV Zakharov, SWJ Prosser… - PloS one, 2013 - journals.plos.org
DNA barcoding protocols require the linkage of each sequence record to a voucher
specimen that has, whenever possible, been authoritatively identified. Natural history …

Small genome symbiont underlies cuticle hardness in beetles

H Anbutsu, M Moriyama, N Nikoh, T Hosokawa… - Proceedings of the …, 2017 - pnas.org
Beetles, representing the majority of the insect species diversity, are characterized by thick
and hard cuticle, which plays important roles for their environmental adaptation and …

Soup to tree: the phylogeny of beetles inferred by mitochondrial metagenomics of a Bornean rainforest sample

A Crampton-Platt, MJTN Timmermans… - Molecular biology …, 2015 - academic.oup.com
In spite of the growth of molecular ecology, systematics and next-generation sequencing, the
discovery and analysis of diversity is not currently integrated with building the tree-of-life …

New Metrics for Comparison of Taxonomies Reveal Striking Discrepancies among Species Delimitation Methods in Madascincus Lizards

A Miralles, M Vences - PLoS One, 2013 - journals.plos.org
Delimiting and describing species is fundamental to numerous biological disciplines such as
evolution, macroecology, and conservation. Delimiting species as independent evolutionary …

Is it time to describe new species without diagnoses?—A comment on Sharkey et al. (2021)

D Ahrens, ST Ahyong, A Ballerio, MVL Barclay… - Zootaxa, 2021 - biotaxa.org
New methods in taxonomy and systematics can influence the overall practice of formally
naming and describing biodiversity. DNA barcoding has been controversial since its …