The implementation of Molecular Dynamics (MD) on FPGAs has received substantial
attention. Previous work, however, has consisted of either proof-of-concept implementations …

A large semantic gap between a high-level synthesis (HLS) design and a low-level RTL
simulation environment often creates a barrier for those who are not field-programmable …

FPGA-accelerated molecular dynamics (MD) research dates back to almost two decades
ago and is still being actively studied. MD on FPGA clusters, however, is still in its initial …

Molecular Dynamics simulation (MD) has been thought a promising FPGA application for
many years, especially with clusters of tightly coupled FPGAs where the large-scale, general …

First steps toward a molecular dynamics (MD) implementation in a cluster of field-
programmable gate arrays (FPGAs) are presented, reaching a simulation speed of a few …

Classical molecular dynamics (MD) simulations are important tools in life and material
sciences since they allow studying chemical and biological processes in detail. However …

Molecular Dynamics simulation (MD) models the interactions of thousands to millions of
particles through the iterative application of fundamental physics, and MD is one of the core …

FPGAs are popular in many fields but have yet to gain wide acceptance for accelerating
HPC codes. A major cause is that whilst the growth of High-Level Synthesis (HLS), enabling …

Molecular Dynamics (MD) is a computer simulation technique that executes iteratively over
discrete, infinitesimal time intervals. It has been a widely utilized application in the fields of …

Abstract FPGA-Centric Clusters (FCCs) with the FPGAs directly linked through their Multi-
Gigabit Transceivers (MGTs) have a proven advantage over other commodity architectures …