Horizontal gene transfer: building the web of life

SM Soucy, J Huang, JP Gogarten - Nature Reviews Genetics, 2015 - nature.com
Horizontal gene transfer (HGT) is the sharing of genetic material between organisms that are
not in a parent–offspring relationship. HGT is a widely recognized mechanism for adaptation …

[BOOK][B] Genomes 5

TA Brown - 2023 - taylorfrancis.com
Genomes 5 has been completely revised and updated. It is a thoroughly modern textbook
about genomes and how they are investigated. As with previous Genomes editions …

Lateral gene transfer, bacterial genome evolution, and the Anthropocene

MR Gillings - Annals of the new York Academy of Sciences, 2017 - Wiley Online Library
Lateral gene transfer (LGT) has significantly influenced bacterial evolution since the origins
of life. It helped bacteria generate flexible, mosaic genomes and enables individual cells to …

Enigmatic distribution, evolution, and function of inteins

O Novikova, N Topilina, M Belfort - Journal of Biological Chemistry, 2014 - ASBMB
Inteins are mobile genetic elements capable of self-splicing post-translationally. They exist
in all three domains of life including in viruses and bacteriophage, where they have a …

A Bayesian method for analyzing lateral gene transfer

J Sjöstrand, A Tofigh, V Daubin, L Arvestad… - Systematic …, 2014 - academic.oup.com
Lateral gene transfer (LGT)—which transfers DNA between two non-vertically related
individuals belonging to the same or different species—is recognized as a major force in …

Public health evolutionary biology of antimicrobial resistance: priorities for intervention

F Baquero, VF Lanza, R Cantón… - Evolutionary …, 2015 - Wiley Online Library
The three main processes sha** the evolutionary ecology of antibiotic resistance (AbR)
involve the emergence, invasion and occupation by antibiotic‐resistant genes of significant …

When barcoding fails: Genome chimerization (admixing) and reticulation obscure phylogenetic and taxonomic relationships

M Sipiczki - Molecular ecology resources, 2022 - Wiley Online Library
DNA barcoding is based on the premise that the barcode sequences can distinguish
individuals (strains) of different species because their sequence variation between species …

Neutral evolution of cellular phenotypes

JG Wideman, A Novick, SA Muñoz-Gómez… - Current Opinion in …, 2019 - Elsevier
Eukaryotes exhibit a great diversity of cellular and subcellular morphologies, but their basic
underlying architecture is fairly constant. All have a nucleus, Golgi, cytoskeleton, plasma …

The pan-genome as a shared genomic resource: mutual cheating, cooperation and the black queen hypothesis

MS Fullmer, SM Soucy, JP Gogarten - Frontiers in microbiology, 2015 - frontiersin.org
Cells have long been recognized as life's building blocks (eg, Virchow's dictum “omnis
cellula e cellula,” Virchow, 1860). Specifically, a cell's genome is considered the repository …

Horizontal persistence and the complexity hypothesis

A Novick, WF Doolittle - Biology & philosophy, 2020 - Springer
This paper investigates the complexity hypothesis in microbial evolutionary genetics from a
philosophical vantage. This hypothesis, in its current version, states that genes with high …