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Proteingym: Large-scale benchmarks for protein fitness prediction and design
Predicting the effects of mutations in proteins is critical to many applications, from
understanding genetic disease to designing novel proteins to address our most pressing …
understanding genetic disease to designing novel proteins to address our most pressing …
PRKN-linked familial Parkinson's disease: cellular and molecular mechanisms of disease-linked variants
Parkinson's disease (PD) is a common and incurable neurodegenerative disorder that
arises from the loss of dopaminergic neurons in the substantia nigra and is mainly …
arises from the loss of dopaminergic neurons in the substantia nigra and is mainly …
Deep mutational scanning reveals a correlation between degradation and toxicity of thousands of aspartoacylase variants
M Grønbæk-Thygesen, V Voutsinos… - Nature …, 2024 - nature.com
Unstable proteins are prone to form non-native interactions with other proteins and thereby
may become toxic. To mitigate this, destabilized proteins are targeted by the protein quality …
may become toxic. To mitigate this, destabilized proteins are targeted by the protein quality …
Site-saturation mutagenesis of 500 human protein domains
Missense variants that change the amino acid sequences of proteins cause one-third of
human genetic diseases. Tens of millions of missense variants exist in the current human …
human genetic diseases. Tens of millions of missense variants exist in the current human …
Site saturation mutagenesis of 500 human protein domains reveals the contribution of protein destabilization to genetic disease
Missense variants that change the amino acid sequences of proteins cause one third of
human genetic diseases. Tens of millions of missense variants exist in the current human …
human genetic diseases. Tens of millions of missense variants exist in the current human …
Therapeutic potential of Parkin and its regulation in Parkinson's disease
N Safreena, IC Nair, G Chandra - Biochemical Pharmacology, 2024 - Elsevier
Parkinson's disease (PD) is a debilitating neurodegenerative disorder characterized by the
progressive loss of dopaminergic neurons in the midbrain substantia nigra, resulting in …
progressive loss of dopaminergic neurons in the midbrain substantia nigra, resulting in …
Variant effect predictor correlation with functional assays is reflective of clinical classification performance
Background Understanding the relationship between protein sequence and function is
crucial for accurate genetic variant classification. Variant effect predictors (VEPs) play a vital …
crucial for accurate genetic variant classification. Variant effect predictors (VEPs) play a vital …
Importance of an N-terminal structural switch in the distinction between small RNA-bound and free ARGONAUTE
S Bressendorff, IMZ Sjøgaard, A Prestel… - Nature Structural & …, 2025 - nature.com
ARGONAUTE (AGO) proteins bind to small non-coding RNAs to form RNA-induced
silencing complexes. In the RNA-bound state, AGO is stable while RNA-free AGO turns over …
silencing complexes. In the RNA-bound state, AGO is stable while RNA-free AGO turns over …
[HTML][HTML] Structural and Functional Characterization of the Most Frequent Pathogenic PRKN Substitution p. R275W
BA Bustillos, LT Cocker, MA Coban, CA Weber… - Cells, 2024 - mdpi.com
Mutations in the PINK1 and PRKN genes are the most frequent genetic cause of early-onset
Parkinson disease. The pathogenic p. R275W substitution in PRKN is the most frequent …
Parkinson disease. The pathogenic p. R275W substitution in PRKN is the most frequent …
Structural basis for the pathogenicity of parkin catalytic domain mutants
Mutations in the E3 ubiquitin ligase parkin cause a familial form of Parkinson's disease.
Parkin and the mitochondrial kinase PTEN-induced kinase 1 assure quality control of …
Parkin and the mitochondrial kinase PTEN-induced kinase 1 assure quality control of …