Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
Lake sedimentary DNA research on past terrestrial and aquatic biodiversity: Overview and recommendations
The use of lake sedimentary DNA to track the long-term changes in both terrestrial and
aquatic biota is a rapidly advancing field in paleoecological research. Although largely …
aquatic biota is a rapidly advancing field in paleoecological research. Although largely …
The development of terrestrial ecosystems emerging after glacier retreat
The global retreat of glaciers is dramatically altering mountain and high-latitude landscapes,
with new ecosystems develo** from apparently barren substrates,,–. The study of these …
with new ecosystems develo** from apparently barren substrates,,–. The study of these …
Dos and don'ts when inferring assembly rules from diversity patterns
Aim More than ever, ecologists seek to understand how species are distributed and have
assembled into communities using the “filtering framework”. This framework is based on the …
assembled into communities using the “filtering framework”. This framework is based on the …
Comparing environmental DNA metabarcoding and underwater visual census to monitor tropical reef fishes
Environmental DNA (eDNA) analysis is a revolutionary method to monitor marine
biodiversity from animal DNA traces. Examining the capacity of eDNA to provide accurate …
biodiversity from animal DNA traces. Examining the capacity of eDNA to provide accurate …
Integrating eDNA metabarcoding and simultaneous underwater visual surveys to describe complex fish communities in a marine biodiversity hotspot
Marine biodiversity can be surveyed using underwater visual censuses and recently with
eDNA metabarcoding. Although a promising tool, eDNA studies have shown contrasting …
eDNA metabarcoding. Although a promising tool, eDNA studies have shown contrasting …
Benchmarking bioinformatic tools for fast and accurate eDNA metabarcoding species identification
Bioinformatic analysis of eDNA metabarcoding data is a crucial step toward rigorously
assessing biodiversity. Many programs are now available for each step of the required …
assessing biodiversity. Many programs are now available for each step of the required …
Marine water environmental DNA metabarcoding provides a comprehensive fish diversity assessment and reveals spatial patterns in a large oceanic area
N Fraija‐Fernández, MC Bouquieaux… - Ecology and …, 2020 - Wiley Online Library
Current methods for monitoring marine fish (including bony fishes and elasmobranchs)
diversity mostly rely on trawling surveys, which are invasive, costly, and time‐consuming …
diversity mostly rely on trawling surveys, which are invasive, costly, and time‐consuming …
Current status of Phytophthora in Australia
Among the most economically relevant and environmentally devastating diseases globally
are those caused by Phytophthora species. In Australia, production losses in agriculture and …
are those caused by Phytophthora species. In Australia, production losses in agriculture and …
How to design optimal eDNA sampling strategies for biomonitoring in river networks
The current biodiversity crisis calls for appropriate methods for assessing biodiversity. In this
respect, environmental DNA (eDNA) holds great promise, especially for aquatic ecosystems …
respect, environmental DNA (eDNA) holds great promise, especially for aquatic ecosystems …