Integrative omics approaches for biosynthetic pathway discovery in plants

KS Singh, JJJ van der Hooft, SCM van Wees… - Natural Product …, 2022 - pubs.rsc.org
Covering: up to 2022 With the emergence of large amounts of omics data, computational
approaches for the identification of plant natural product biosynthetic pathways and their …

Systematic multi-omics integration (MOI) approach in plant systems biology

IN Jamil, J Remali, KA Azizan… - Frontiers in plant …, 2020 - frontiersin.org
Across all facets of biology, the rapid progress in high-throughput data generation has
enabled us to perform multi-omics systems biology research. Transcriptomics, proteomics …

Stress combinations and their interactions in plants database: a one‐stop resource on combined stress responses in plants

P Priya, M Patil, P Pandey, A Singh, VS Babu… - The Plant …, 2023 - Wiley Online Library
We have developed a compendium and interactive platform, named Stress Combinations
and their Interactions in Plants Database (SCIPDb; http://www. nipgr. ac. in/scipdb. php) …

The current developments in medicinal plant genomics enabled the diversification of secondary metabolites' biosynthesis

MM Alami, Z Ouyang, Y Zhang, S Shu, G Yang… - International journal of …, 2022 - mdpi.com
Medicinal plants produce important substrates for their adaptation and defenses against
environmental factors and, at the same time, are used for traditional medicine and industrial …

Effect and response of Quercus ilex subsp. ballota [Desf.] Samp. seedlings from three contrasting Andalusian populations to individual and combined Phytophthora …

B San-Eufrasio, MÁ Castillejo… - Frontiers in Plant …, 2021 - frontiersin.org
Quercus ilex L. is the dominant species in the Mediterranean forest and agrosilvopastoral
ecosystem “dehesa.” Currently, this forest species is threatened by natural and …

Multiomics Molecular Research into the Recalcitrant and Orphan Quercus ilex Tree Species: Why, What for, and How

AM Maldonado-Alconada, MÁ Castillejo… - International Journal of …, 2022 - mdpi.com
The holm oak (Quercus ilex L.) is the dominant tree species of the Mediterranean forest and
the Spanish agrosilvopastoral ecosystem,“dehesa.” It has been, since the prehistoric period …

Phytochemical composition and variability in Quercus ilex acorn morphotypes as determined by NIRS and MS-based approaches

C López-Hidalgo, M Menéndez, JV Jorrin-Novo - Food chemistry, 2021 - Elsevier
Quercus acorns have been used as a staple food since archeological times; currently, there
is a renewed interest in the direct use of the acorns as nuts or as a source of consumable …

Holm oak somatic embryogenesis: Current status and future perspectives

MT Martínez, MC San-José, I Arrillaga… - Frontiers in Plant …, 2019 - frontiersin.org
Quercus ilex (holm oak) is one of the most representative trees in the Mediterranean basin,
but now the sustainability of its ecosystems is at serious risk due to the lack of natural …

Molecular Research on Stress Responses in Quercus spp.: From Classical Biochemistry to Systems Biology through Omics Analysis

M Escandón, MÁ Castillejo, JV Jorrín-Novo, MD Rey - Forests, 2021 - mdpi.com
The genus Quercus (oak), family Fagaceae, comprises around 500 species, being one of
the most important and dominant woody angiosperms in the Northern Hemisphere …

Multiomic Data Integration in the Analysis of Drought-Responsive Mechanisms in Quercus ilex Seedlings

VM Guerrero-Sánchez, C López-Hidalgo, MD Rey… - Plants, 2022 - mdpi.com
The integrated analysis of different omic layers can provide new knowledge not provided by
their individual analysis. This approach is also necessary to validate data and reveal post …