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Machine-learning solutions for the analysis of single-particle diffusion trajectories
Single-particle traces of the diffusive motion of molecules, cells, or animals are by now
routinely measured, similar to stochastic records of stock prices or weather data …
routinely measured, similar to stochastic records of stock prices or weather data …
Single-particle diffusional fingerprinting: A machine-learning framework for quantitative analysis of heterogeneous diffusion
Single-particle tracking (SPT) is a key tool for quantitative analysis of dynamic biological
processes and has provided unprecedented insights into a wide range of systems such as …
processes and has provided unprecedented insights into a wide range of systems such as …
Measurement of anomalous diffusion using recurrent neural networks
Anomalous diffusion occurs in many physical and biological phenomena, when the growth
of the mean squared displacement (MSD) with time has an exponent different from one. We …
of the mean squared displacement (MSD) with time has an exponent different from one. We …
Classification, inference and segmentation of anomalous diffusion with recurrent neural networks
Countless systems in biology, physics, and finance undergo diffusive dynamics. Many of
these systems, including biomolecules inside cells, active matter systems and foraging …
these systems, including biomolecules inside cells, active matter systems and foraging …
Classification of particle trajectories in living cells: Machine learning versus statistical testing hypothesis for fractional anomalous diffusion
Single-particle tracking (SPT) has become a popular tool to study the intracellular transport
of molecules in living cells. Inferring the character of their dynamics is important, because it …
of molecules in living cells. Inferring the character of their dynamics is important, because it …
Synchronization for fractional-order reaction–diffusion competitive neural networks with leakage and discrete delays
S Yang, H Jiang, C Hu, J Yu - Neurocomputing, 2021 - Elsevier
This paper is concerned with the synchronization of fractional-order competitive neural
networks with reaction–diffusion terms and time delays. A novel method that combines the …
networks with reaction–diffusion terms and time delays. A novel method that combines the …
Characterization of anomalous diffusion classical statistics powered by deep learning (CONDOR)
Diffusion processes are important in several physical, chemical, biological and human
phenomena. Examples include molecular encounters in reactions, cellular signalling, the …
phenomena. Examples include molecular encounters in reactions, cellular signalling, the …
[HTML][HTML] Trajectory Analysis in Single-Particle Tracking: From Mean Squared Displacement to Machine Learning Approaches
Single-particle tracking is a powerful technique to investigate the motion of molecules or
particles. Here, we review the methods for analyzing the reconstructed trajectories, a …
particles. Here, we review the methods for analyzing the reconstructed trajectories, a …
Universal spectral features of different classes of random-diffusivity processes
Stochastic models based on random diffusivities, such as the diffusing-diffusivity approach,
are popular concepts for the description of non-Gaussian diffusion in heterogeneous media …
are popular concepts for the description of non-Gaussian diffusion in heterogeneous media …
Impact of feature choice on machine learning classification of fractional anomalous diffusion
The growing interest in machine learning methods has raised the need for a careful study of
their application to the experimental single-particle tracking data. In this paper, we present …
their application to the experimental single-particle tracking data. In this paper, we present …