Computational neuroscience: Mathematical and statistical perspectives

RE Kass, SI Amari, K Arai, EN Brown… - Annual review of …, 2018 - annualreviews.org
Mathematical and statistical models have played important roles in neuroscience, especially
by describing the electrical activity of neurons recorded individually, or collectively across …

Optimal solid state neurons

K Abu-Hassan, JD Taylor, PG Morris, E Donati… - Nature …, 2019 - nature.com
Bioelectronic medicine is driving the need for neuromorphic microcircuits that integrate raw
nervous stimuli and respond identically to biological neurons. However, designing such …

Automated high-throughput characterization of single neurons by means of simplified spiking models

C Pozzorini, S Mensi, O Hagens, R Naud… - PLoS computational …, 2015 - journals.plos.org
Single-neuron models are useful not only for studying the emergent properties of neural
circuits in large-scale simulations, but also for extracting and summarizing in a principled …

Estimating parameters and predicting membrane voltages with conductance-based neuron models

CD Meliza, M Kostuk, H Huang, A Nogaret… - Biological …, 2014 - Springer
Recent results demonstrate techniques for fully quantitative, statistical inference of the
dynamics of individual neurons under the Hodgkin–Huxley framework of voltage-gated …

Silicon central pattern generators for cardiac diseases

A Nogaret, EL O'Callaghan, RM Lataro… - The Journal of …, 2015 - Wiley Online Library
Cardiac rhythm management devices provide therapies for both arrhythmias and
resynchronisation but not heart failure, which affects millions of patients worldwide. This …

Automatic construction of predictive neuron models through large scale assimilation of electrophysiological data

A Nogaret, CD Meliza, D Margoliash, HDI Abarbanel - Scientific reports, 2016 - nature.com
We report on the construction of neuron models by assimilating electrophysiological data
with large-scale constrained nonlinear optimization. The method implements interior point …

On a framework of data assimilation for hyperparameter estimation of spiking neuronal networks

W Zhang, B Chen, J Feng, W Lu - Neural Networks, 2024 - Elsevier
When handling real-world data modeled by a complex network dynamical system, the
number of the parameters is often much more than the size of the data. Therefore, in many …

A flexible, interactive software tool for fitting the parameters of neuronal models

P Friedrich, M Vella, AI Gulyás, TF Freund… - Frontiers in …, 2014 - frontiersin.org
The construction of biologically relevant neuronal models as well as model-based analysis
of experimental data often requires the simultaneous fitting of multiple model parameters, so …

[HTML][HTML] Estimating time-varying applied current in the Hodgkin-Huxley model

K Campbell, L Staugler, A Arnold - Applied Sciences, 2020 - mdpi.com
The classic Hodgkin-Huxley model is widely used for understanding the electrophysiological
dynamics of a single neuron. While applying a low-amplitude constant current to the system …

Parameter identifiability and identifiable combinations in generalized Hodgkin–Huxley models

OJ Walch, MC Eisenberg - Neurocomputing, 2016 - Elsevier
Abstract The use of Hodgkin–Huxley (HH) equations abounds in the literature, but the
identifiability of the HH model parameters has not been broadly considered. Identifiability …