Monai: An open-source framework for deep learning in healthcare

MJ Cardoso, W Li, R Brown, N Ma, E Kerfoot… - arxiv preprint arxiv …, 2022 - arxiv.org
Artificial Intelligence (AI) is having a tremendous impact across most areas of science.
Applications of AI in healthcare have the potential to improve our ability to detect, diagnose …

Glioma survival analysis empowered with data engineering—a survey

N Wijethilake, D Meedeniya, C Chitraranjan… - Ieee …, 2021 - ieeexplore.ieee.org
Survival analysis is a critical task in glioma patient management due to the inter and intra
tumor heterogeneity. In clinical practice, clinicians estimate the survival with their …

The ANTsX ecosystem for quantitative biological and medical imaging

NJ Tustison, PA Cook, AJ Holbrook, HJ Johnson… - Scientific reports, 2021 - nature.com
Abstract The Advanced Normalizations Tools ecosystem, known as ANTsX, consists of
multiple open-source software libraries which house top-performing algorithms used …

GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows

S Pati, SP Thakur, İE Hamamcı, U Baid… - Communications …, 2023 - nature.com
Deep Learning (DL) has the potential to optimize machine learning in both the scientific and
clinical communities. However, greater expertise is required to develop DL algorithms, and …

[HTML][HTML] Residual Aligner-based Network (RAN): Motion-separable structure for coarse-to-fine discontinuous deformable registration

JQ Zheng, Z Wang, B Huang, NH Lim, BW Papież - Medical Image Analysis, 2024 - Elsevier
Deformable image registration, the estimation of the spatial transformation between different
images, is an important task in medical imaging. Deep learning techniques have been …

[HTML][HTML] Prior knowledge based deep learning auto-segmentation in magnetic resonance imaging-guided radiotherapy of prostate cancer

M Kawula, M Vagni, D Cusumano, L Boldrini… - Physics and Imaging in …, 2023 - Elsevier
Background and purpose Automation is desirable for organ segmentation in radiotherapy.
This study compared deep learning methods for auto-segmentation of organs-at-risk (OARs) …

Meta-learning initializations for interactive medical image registration

ZMC Baum, Y Hu, DC Barratt - IEEE transactions on medical …, 2022 - ieeexplore.ieee.org
We present a meta-learning framework for interactive medical image registration. Our
proposed framework comprises three components: a learning-based medical image …

[HTML][HTML] Deep learning image registration for cardiac motion estimation in adult and fetal echocardiography via a focus on anatomic plausibility and texture quality of …

MK Hasan, H Zhu, G Yang, CH Yap - Computers in Biology and Medicine, 2025 - Elsevier
Temporal echocardiography image registration is important for cardiac motion estimation,
myocardial strain assessments, and stroke volume quantifications. Deep learning image …

Regional deep atrophy: Using temporal information to automatically identify regions associated with Alzheimer's disease progression from longitudinal MRI

M Dong, L **e, SR Das, J Wang, LEM Wisse… - Imaging …, 2024 - direct.mit.edu
Longitudinal assessment of brain atrophy, particularly in the hippocampus, is a well-studied
biomarker for neurodegenerative diseases, such as Alzheimer's disease (AD). Estimating …

Cross-Modality Image Registration Using a Training-Time Privileged Third Modality

Q Yang, D Atkinson, Y Fu, T Syer, W Yan… - … on Medical Imaging, 2022 - ieeexplore.ieee.org
In this work, we consider the task of pairwise cross-modality image registration, which may
benefit from exploiting additional images available only at training time from an additional …