RpoS and the bacterial general stress response

S Bouillet, TS Bauer, S Gottesman - Microbiology and Molecular …, 2024 - journals.asm.org
The general stress response (GSR) is a widespread strategy developed by bacteria to adapt
and respond to their changing environments. The GSR is induced by one or multiple …

Local and global regulation of transcription initiation in bacteria

DF Browning, SJW Busby - Nature Reviews Microbiology, 2016 - nature.com
Gene expression in bacteria relies on promoter recognition by the DNA-dependent RNA
polymerase and subsequent transcription initiation. Bacterial cells are able to tune their …

Transcription factors and evolution: An integral part of gene expression

T Mitsis, A Efthimiadou… - World Academy of …, 2020 - spandidos-publications.com
Gene expression is a complex process that is essential to living organisms. Gene
expression plays the important role of converting information that is encoded in a gene into a …

The emergence of 2-oxoglutarate as a master regulator metabolite

LF Huergo, R Dixon - Microbiology and Molecular Biology …, 2015 - journals.asm.org
The metabolite 2-oxoglutarate (also known as α-ketoglutarate, 2-ketoglutaric acid, or
oxoglutaric acid) lies at the intersection between the carbon and nitrogen metabolic …

Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology

I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …

Mechanisms of endogenous and exogenous partial denitrification in response to different carbon/nitrogen ratios: transcript levels, nitrous oxide production, electron …

H Wu, W Zeng, L Wu, S Lu, Y Peng - Bioresource Technology, 2024 - Elsevier
Nitrite as an important substrate for Anammox can be provided by partial denitrification (PD).
In this study, endogenous partial denitrification (EdPD) and exogenous partial denitrification …

Engineering prokaryotic transcriptional activators as metabolite biosensors in yeast

ML Skjoedt, T Snoek, KR Kildegaard… - Nature chemical …, 2016 - nature.com
Whole-cell biocatalysts have proven a tractable path toward sustainable production of bulk
and fine chemicals. Yet the screening of libraries of cellular designs to identify best …

Pervasive transcription: illuminating the dark matter of bacterial transcriptomes

JT Wade, DC Grainger - Nature Reviews Microbiology, 2014 - nature.com
The conventional view of transcription posits that mRNAs are generated from the coding
DNA strand and are delineated by gene boundaries; however, recent reports have mapped …

Initial events in bacterial transcription initiation

EF Ruff, MT Record Jr, I Artsimovitch - Biomolecules, 2015 - mdpi.com
Transcription initiation is a highly regulated step of gene expression. Here, we discuss the
series of large conformational changes set in motion by initial specific binding of bacterial …

c-di-GMP signalling and the regulation of developmental transitions in streptomycetes

MJ Bush, N Tschowri, S Schlimpert, K Flärdh… - Nature Reviews …, 2015 - nature.com
The complex life cycle of streptomycetes involves two distinct filamentous cell forms: the
growing (or vegetative) hyphae and the reproductive (or aerial) hyphae, which differentiate …