Drugging the undruggable RAS: Mission possible?

AD Cox, SW Fesik, AC Kimmelman, J Luo… - Nature reviews Drug …, 2014 - nature.com
Despite more than three decades of intensive effort, no effective pharmacological inhibitors
of the RAS oncoproteins have reached the clinic, prompting the widely held perception that …

Radiogenomics in renal cancer management—current evidence and future prospects

M Ferro, G Musi, M Marchioni, M Maggi… - International journal of …, 2023 - mdpi.com
Renal cancer management is challenging from diagnosis to treatment and follow-up. In
cases of small renal masses and cystic lesions the differential diagnosis of benign or …

A positive feedback loop between inactive VHL-triggered histone lactylation and PDGFRβ signaling drives clear cell renal cell carcinoma progression

J Yang, L Luo, C Zhao, X Li, Z Wang… - … journal of biological …, 2022 - pmc.ncbi.nlm.nih.gov
Inactive von Hippel-Lindau (VHL) is linked to metabolic reprogramming and plays pivotal
roles in the pathogenesis of clear cell renal cell carcinoma (ccRCC). Here, we identify a …

Uncovering novel mutational signatures by de novo extraction with SigProfilerExtractor

SMA Islam, M Díaz-Gay, Y Wu, M Barnes, R Vangara… - Cell genomics, 2022 - cell.com
Mutational signature analysis is commonly performed in cancer genomic studies. Here, we
present SigProfilerExtractor, an automated tool for de novo extraction of mutational …

[HTML][HTML] Integrated proteogenomic characterization of clear cell renal cell carcinoma

DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song… - Cell, 2019 - cell.com
To elucidate the deregulated functional modules that drive clear cell renal cell carcinoma
(ccRCC), we performed comprehensive genomic, epigenomic, transcriptomic, proteomic …

Identifying recurrent mutations in cancer reveals widespread lineage diversity and mutational specificity

MT Chang, S Asthana, SP Gao, BH Lee… - Nature …, 2016 - nature.com
Mutational hotspots indicate selective pressure across a population of tumor samples, but
their prevalence within and across cancer types is incompletely characterized. An approach …

Signatures of mutational processes in human cancer

LB Alexandrov, S Nik-Zainal, DC Wedge… - nature, 2013 - nature.com
All cancers are caused by somatic mutations; however, understanding of the biological
processes generating these mutations is limited. The catalogue of somatic mutations from a …

Comprehensive molecular characterization of clear cell renal cell carcinoma

Genetic changes underlying clear cell renal cell carcinoma (ccRCC) include alterations in
genes controlling cellular oxygen sensing (for example, VHL) and the maintenance of …

Genomic architecture and evolution of clear cell renal cell carcinomas defined by multiregion sequencing

M Gerlinger, S Horswell, J Larkin, AJ Rowan… - Nature …, 2014 - nature.com
Clear cell renal carcinomas (ccRCCs) can display intratumor heterogeneity (ITH). We
applied multiregion exome sequencing (M-seq) to resolve the genetic architecture and …

VHL, the story of a tumour suppressor gene

L Gossage, T Eisen, ER Maher - Nature Reviews Cancer, 2015 - nature.com
Abstract Since the Von Hippel–Lindau (VHL) disease tumour suppressor gene VHL was
identified in 1993 as the genetic basis for a rare disorder, it has proved to be of wide medical …