PowerCHORD: constructing optimal experimental designs for biological rhythm discovery

T Silverthorne, M Carlucci, A Petronis, AR Stinchcombe - bioRxiv, 2024 - biorxiv.org
Equally spaced temporal sampling is the standard protocol for the study of biological
rhythms. These equispaced designs perform well when calibrated to an oscillator's period …

Finding the largest fixed-density necklace and Lyndon word

J Sawada, P Hartman - Information Processing Letters, 2017 - Elsevier
We present an O (n) time algorithm for finding the lexicographically largest fixed-density
necklace of length n. Then we determine whether or not a given string can be extended to a …