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Deep learning in image-based phenotypic drug discovery
Modern drug discovery approaches often use high-content imaging to systematically study
the effect on cells of large libraries of chemical compounds. By automatically screening …
the effect on cells of large libraries of chemical compounds. By automatically screening …
[HTML][HTML] ASF-YOLO: A novel YOLO model with attentional scale sequence fusion for cell instance segmentation
We propose a novel Attentional Scale Sequence Fusion based You Only Look Once (YOLO)
framework (ASF-YOLO) which combines spatial and scale features for accurate and fast cell …
framework (ASF-YOLO) which combines spatial and scale features for accurate and fast cell …
The multimodality cell segmentation challenge: toward universal solutions
Cell segmentation is a critical step for quantitative single-cell analysis in microscopy images.
Existing cell segmentation methods are often tailored to specific modalities or require …
Existing cell segmentation methods are often tailored to specific modalities or require …
Opportunities and challenges for deep learning in cell dynamics research
The growth of artificial intelligence (AI) has led to an increase in the adoption of computer
vision and deep learning (DL) techniques for the evaluation of microscopy images and …
vision and deep learning (DL) techniques for the evaluation of microscopy images and …
SCS: cell segmentation for high-resolution spatial transcriptomics
Spatial transcriptomics promises to greatly improve our understanding of tissue organization
and cell–cell interactions. While most current platforms for spatial transcriptomics only offer …
and cell–cell interactions. While most current platforms for spatial transcriptomics only offer …
Annotation of spatially resolved single-cell data with STELLAR
Accurate cell-type annotation from spatially resolved single cells is crucial to understand
functional spatial biology that is the basis of tissue organization. However, current …
functional spatial biology that is the basis of tissue organization. However, current …
Nuclei segmentation using attention aware and adversarial networks
E Goceri - Neurocomputing, 2024 - Elsevier
Accurate segmentation of nuclei plays a critical role in pathology since assessments and
diagnoses are mainly based on the recognition, measurement, and counting of nuclei …
diagnoses are mainly based on the recognition, measurement, and counting of nuclei …
Clusterseg: A crowd cluster pinpointed nucleus segmentation framework with cross-modality datasets
The detection and segmentation of individual cells or nuclei is often involved in image
analysis across a variety of biology and biomedical applications as an indispensable …
analysis across a variety of biology and biomedical applications as an indispensable …
An ensemble method with edge awareness for abnormally shaped nuclei segmentation
Abnormalities in biological cell nuclei shapes are correlated with cell cycle stages, disease
states, and various external stimuli. There have been many deep learning approaches that …
states, and various external stimuli. There have been many deep learning approaches that …
Histopathological image classification with cell morphology aware deep neural networks
Histopathological images are widely used for the analysis of diseased (tumor) tissues and
patient treatment selection. While the majority of microscopy image processing was …
patient treatment selection. While the majority of microscopy image processing was …