Artificial intelligence for proteomics and biomarker discovery

M Mann, C Kumar, WF Zeng, MT Strauss - Cell systems, 2021 - cell.com
There is an avalanche of biomedical data generation and a parallel expansion in
computational capabilities to analyze and make sense of these data. Starting with genome …

Natural product drug discovery in the artificial intelligence era

FI Saldívar-González, VD Aldas-Bulos… - Chemical …, 2022 - pubs.rsc.org
Natural products (NPs) are primarily recognized as privileged structures to interact with
protein drug targets. Their unique characteristics and structural diversity continue to marvel …

Molecular and network-level mechanisms explaining individual differences in autism spectrum disorder

AM Buch, PE Vértes, J Seidlitz, SH Kim… - Nature …, 2023 - nature.com
The mechanisms underlying phenotypic heterogeneity in autism spectrum disorder (ASD)
are not well understood. Using a large neuroimaging dataset, we identified three latent …

A modern approach towards an industry 4.0 model: From driving technologies to management

G Tsaramirsis, A Kantaros, I Al-Darraji… - Journal of …, 2022 - Wiley Online Library
Every so often, a confluence of novel technologies emerges that radically transforms every
aspect of the industry, the global economy, and finally, the way we live. These sharp leaps of …

Opportunities and challenges for machine learning in materials science

D Morgan, R Jacobs - Annual Review of Materials Research, 2020 - annualreviews.org
Advances in machine learning have impacted myriad areas of materials science, such as
the discovery of novel materials and the improvement of molecular simulations, with likely …

Cross-type biomedical named entity recognition with deep multi-task learning

X Wang, Y Zhang, X Ren, Y Zhang, M Zitnik… - …, 2019 - academic.oup.com
Motivation State-of-the-art biomedical named entity recognition (BioNER) systems often
require handcrafted features specific to each entity type, such as genes, chemicals and …

The role of ontologies in biological and biomedical research: a functional perspective

R Hoehndorf, PN Schofield… - Briefings in …, 2015 - academic.oup.com
Ontologies are widely used in biological and biomedical research. Their success lies in their
combination of four main features present in almost all ontologies: provision of standard …

Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research

À Bravo, J Piñero, N Queralt-Rosinach, M Rautschka… - BMC …, 2015 - Springer
Background Current biomedical research needs to leverage and exploit the large amount of
information reported in scientific publications. Automated text mining approaches, in …

A comprehensive and quantitative comparison of text-mining in 15 million full-text articles versus their corresponding abstracts

D Westergaard, HH Stærfeldt, C Tønsberg… - PLoS computational …, 2018 - journals.plos.org
Across academia and industry, text mining has become a popular strategy for kee** up
with the rapid growth of the scientific literature. Text mining of the scientific literature has …

Big data in medicine is driving big changes

F Martin-Sanchez, K Verspoor - Yearbook of medical …, 2014 - thieme-connect.com
Objectives: To summarise current research that takes advantage of “Big Data” in health and
biomedical informatics applications. Methods: Survey of trends in this work, and exploration …