Contextual determinants of TGFβ action in development, immunity and cancer

CJ David, J Massagué - Nature reviews Molecular cell biology, 2018 - nature.com
Few cell signals match the impact of the transforming growth factor-β (TGFβ) family in
metazoan biology. TGFβ cytokines regulate cell fate decisions during development, tissue …

Transforming growth factor-β in stem cells and tissue homeostasis

X Xu, L Zheng, Q Yuan, G Zhen, JL Crane, X Zhou… - Bone research, 2018 - nature.com
Abstract TGF-β 1–3 are unique multi-functional growth factors that are only expressed in
mammals, and mainly secreted and stored as a latent complex in the extracellular matrix …

Multilineage communication regulates human liver bud development from pluripotency

JG Camp, K Sekine, T Gerber, H Loeffler-Wirth… - Nature, 2017 - nature.com
Conventional two-dimensional differentiation from pluripotency fails to recapitulate cell
interactions occurring during organogenesis. Three-dimensional organoids generate …

Signaling cross talk between TGF-β/Smad and other signaling pathways

K Luo - Cold Spring Harbor perspectives in biology, 2017 - cshperspectives.cshlp.org
Cytokines of the transforming growth factor β (TGF-β) family, including TGF-βs, bone
morphogenic proteins (BMPs), activins, and Nodal, play crucial roles in embryonic …

The SMAD2/3 interactome reveals that TGFβ controls m6A mRNA methylation in pluripotency

A Bertero, S Brown, P Madrigal, A Osnato, D Ortmann… - Nature, 2018 - nature.com
The TGFβ pathway has essential roles in embryonic development, organ homeostasis,
tissue repair and disease,. These diverse effects are mediated through the intracellular …

A method to recapitulate early embryonic spatial patterning in human embryonic stem cells

A Warmflash, B Sorre, F Etoc, ED Siggia… - Nature methods, 2014 - nature.com
Embryos allocate cells to the three germ layers in a spatially ordered sequence. Human
embryonic stem cells (hESCs) can generate the three germ layers in culture; however …

Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data

Q Qin, J Fan, R Zheng, C Wan, S Mei, Q Wu, H Sun… - Genome biology, 2020 - Springer
Abstract We developed Lisa (http://lisa. cistrome. org/) to predict the transcriptional
regulators (TRs) of differentially expressed or co-expressed gene sets. Based on the input …

Sox2 levels regulate the chromatin occupancy of WNT mediators in epiblast progenitors responsible for vertebrate body formation

R Blassberg, H Patel, T Watson, M Gouti, V Metzis… - Nature Cell …, 2022 - nature.com
WNT signalling has multiple roles. It maintains pluripotency of embryonic stem cells, assigns
posterior identity in the epiblast and induces mesodermal tissue. Here we provide evidence …

Distinct lineage specification roles for NANOG, OCT4, and SOX2 in human embryonic stem cells

Z Wang, E Oron, B Nelson, S Razis, N Ivanova - Cell stem cell, 2012 - cell.com
Summary Nanog, Oct4, and Sox2 are the core regulators of mouse (m) ESC pluripotency.
Although their basic importance in human (h) ESCs has been demonstrated, the …

Efficient endoderm induction from human pluripotent stem cells by logically directing signals controlling lineage bifurcations

KM Loh, LT Ang, J Zhang, V Kumar, J Ang, JQ Auyeong… - Cell stem cell, 2014 - cell.com
Human pluripotent stem cell (hPSC) differentiation typically yields heterogeneous
populations. Knowledge of signals controlling embryonic lineage bifurcations could …