Intron retention and its impact on gene expression and protein diversity: A review and a practical guide
DF Grabski, L Broseus, B Kumari… - Wiley …, 2021 - Wiley Online Library
Intron retention (IR) occurs when a complete and unspliced intron remains in mature mRNA.
An increasing body of literature has demonstrated a major role for IR in numerous biological …
An increasing body of literature has demonstrated a major role for IR in numerous biological …
Single-molecule imaging reveals distinct elongation and frameshifting dynamics between frames of expanded RNA repeats in C9ORF72-ALS/FTD
C9ORF72 hexanucleotide repeat expansion is the most common genetic cause of both
amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). One pathogenic …
amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). One pathogenic …
Taming human brain organoids one cell at a time
Human brain organoids are self-organizing three-dimensional structures that emerge from
human pluripotent stem cells and mimic aspects of the cellular composition and functionality …
human pluripotent stem cells and mimic aspects of the cellular composition and functionality …
Pyruvate Kinase M (PKM) binds ribosomes in a poly-ADP ribosylation dependent manner to induce translational stalling
In light of the numerous studies identifying post-transcriptional regulators on the surface of
the endoplasmic reticulum (ER), we asked whether there are factors that regulate …
the endoplasmic reticulum (ER), we asked whether there are factors that regulate …
PDCD4 regulates axonal growth by translational repression of neurite growth-related genes and is modulated during nerve injury responses
Programmed cell death 4 (PDCD4) protein is a tumor suppressor that inhibits translation
through the mTOR-dependent initiation factor EIF4A, but its functional role and mRNA …
through the mTOR-dependent initiation factor EIF4A, but its functional role and mRNA …
Transcriptomic and translatomic analyses reveal insights into the developmental regulation of secondary metabolism in the young shoots of tea plants (Camellia …
LY Wu, YQ Lv, Y Ye, YR Liang… - Journal of Agricultural and …, 2020 - ACS Publications
Accumulation of secondary metabolites in the young shoots of tea plants is developmentally
modulated, especially flavonoids. Here, we investigate the developmental regulation …
modulated, especially flavonoids. Here, we investigate the developmental regulation …
smORFer: a modular algorithm to detect small ORFs in prokaryotes
Emerging evidence places small proteins (≤ 50 amino acids) more centrally in
physiological processes. Yet, their functional identification and the systematic genome …
physiological processes. Yet, their functional identification and the systematic genome …
Integrated transcriptomic and translatomic inquiry of the role of betaine on lipid metabolic dysregulation induced by a high-fat diet
T Huang, L Yu, H Pan, Z Ma, T Wu, L Zhang… - Frontiers in …, 2021 - frontiersin.org
An excessive high-fat/energy diet is a major cause of obesity and linked complications, such
as non-alcoholic fatty liver disease (NAFLD). Betaine has been shown to effectively improve …
as non-alcoholic fatty liver disease (NAFLD). Betaine has been shown to effectively improve …
CRYPTOCHROMES promote daily protein homeostasis
The daily organisation of most mammalian cellular functions is attributed to circadian
regulation of clock‐controlled protein expression, driven by daily cycles of …
regulation of clock‐controlled protein expression, driven by daily cycles of …
Separation and paired proteome profiling of plant chloroplast and cytoplasmic ribosomes
Conventional preparation methods of plant ribosomes fail to resolve non-translating
chloroplast or cytoplasmic ribosome subunits from translating fractions. We established …
chloroplast or cytoplasmic ribosome subunits from translating fractions. We established …