The landscape of lysogeny across microbial community density, diversity and energetics

CB Silveira, A Luque, F Rohwer - Environmental microbiology, 2021 - Wiley Online Library
Lysogens are common at high bacterial densities, an observation that contrasts with the
prevailing view of lysogeny as a low‐density refugium strategy. Here, we review the …

Lytic/lysogenic transition as a life-history switch

J Roughgarden - Virus evolution, 2024 - academic.oup.com
The transition between lytic and lysogenic life cycles is the most important feature of the life-
history of temperate viruses. To explain this transition, an optimal life-history model is offered …

Bacteria, protists, and fungi may hold clues of seamount impact on diversity and connectivity of deep-sea pelagic communities

R Zhao, F Zhao, S Zheng, X Li, J Wang… - Frontiers in Microbiology, 2022 - frontiersin.org
The topography and hydrography around seamounts have a strong influence on plankton
biogeography. The intrinsic properties of various biological taxa inherently also shape their …

Selfish bacteria are active throughout the water column of the ocean

G Giljan, S Brown, CC Lloyd, S Ghobrial… - ISME …, 2023 - academic.oup.com
Heterotrophic bacteria in the ocean invest carbon, nitrogen, and energy in extracellular
enzymes to hydrolyze large substrates to smaller sizes suitable for uptake. Since hydrolysis …

Abundance and microbial diversity from surface to deep water layers over the Rio Grande Rise, South Atlantic

JCN Ferreira, NM Bergo, PM Tura, MG Chuqui… - Progress in …, 2022 - Elsevier
Marine microbes control the flux of matter and energy essential for life in the oceans. Until
now, the distribution and diversity of planktonic microorganisms above Fe-Mn crusts have …

Archaea predominate in the ammonia oxidation process in the sediments of the Yap and Mariana Trenches

H Liu, H **g, F Wang - Frontiers in Microbiology, 2023 - frontiersin.org
Ammonia-oxidizing archaea (AOA) and bacteria (AOB) play an important role in oxidizing
ammonia to nitrite in different marine environments; however, their relative contribution to …

Predicting the presence and abundance of bacterial taxa in environmental communities through flow cytometric fingerprinting

J Heyse, F Schattenberg, P Rubbens, S Müller… - …, 2021 - journals.asm.org
Microbiome management research and applications rely on temporally resolved
measurements of community composition. Current technologies to assess community …

Geographical distribution and driving force of micro-eukaryotes in the seamount sediments along the island arc of the Yap and Mariana trenches

Y Zhang, H Liu, N Huang, X Peng… - Microbiology Spectrum, 2023 - journals.asm.org
The specific topographic characteristics and complex hydrodynamics of seamounts could
directly or indirectly affect the distribution and trophic status of microbes. However, little is …

Diversity and ecological potentials of viral assemblages from the seamount sediments of the Northwest Pacific Ocean

Y Chen, C Gao, Q Liu, Y Liang, M Lai, F Ge, H Yu… - bioRxiv, 2024 - biorxiv.org
Viruses are the most abundant life forms in the sea, influencing the community structure and
metabolism of host cells as well as biogeochemical cycles. However, the diversity and …

基于环境 RNA 研究海山效应对浮游细菌多样性和分布的影响

尹婷婷, 赵峰, 刘巍岳, 徐奎栋 - 水生生物学报, 2024 - aquaticjournal.com
研究采用环境RNA 技术探究西太**洋M4 海山区细菌多样性, 并与基于环境DNA
技术的研究结果进行比较, 解析细菌代谢活性特征. 结果表明基于环境RNA 和DNA …