[HTML][HTML] Nanopore sequencing technology, bioinformatics and applications

Y Wang, Y Zhao, A Bollas, Y Wang, KF Au - Nature biotechnology, 2021 - nature.com
Rapid advances in nanopore technologies for sequencing single long DNA and RNA
molecules have led to substantial improvements in accuracy, read length and throughput …

Overview of next‐generation sequencing technologies

BE Slatko, AF Gardner… - Current protocols in …, 2018 - Wiley Online Library
High throughput DNA sequencing methodology (next generation sequencing; NGS) has
rapidly evolved over the past 15 years and new methods are continually being …

Three decades of nanopore sequencing

D Deamer, M Akeson, D Branton - Nature biotechnology, 2016 - nature.com
A long-held goal in sequencing has been to use a voltage-biased nanoscale pore in a
membrane to measure the passage of a linear, single-stranded (ss) DNA or RNA molecule …

Nanopore-based fourth-generation DNA sequencing technology

Y Feng, Y Zhang, C Ying, D Wang… - Genomics, Proteomics …, 2015 - academic.oup.com
Nanopore-based sequencers, as the fourth-generation DNA sequencing technology, have
the potential to quickly and reliably sequence the entire human genome for less than 1000 …

Discrimination of oligonucleotides of different lengths with a wild-type aerolysin nanopore

C Cao, YL Ying, ZL Hu, DF Liao, H Tian… - Nature …, 2016 - nature.com
Protein nanopores offer an inexpensive, label-free method of analysing single
oligonucleotides. The sensitivity of the approach is largely determined by the characteristics …

[LIVRE][B] Solid-state nanopore sensors for nucleic acid analysis

BM Venkatesan, R Bashir - 2011 - Springer
Solid-state nanopores are nm sized apertures formed in thin synthetic membranes. These
single molecule sensors have been used in a variety of biophysical and diagnostic …

Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase

EA Manrao, IM Derrington, AH Laszlo… - Nature …, 2012 - nature.com
Nanopore technologies are being developed for fast and direct sequencing of single DNA
molecules through detection of ionic current modulations as DNA passes through a pore's …

The potential and challenges of nanopore sequencing

D Branton, DW Deamer, A Marziali, H Bayley… - Nature …, 2008 - nature.com
A nanopore-based device provides single-molecule detection and analytical capabilities
that are achieved by electrophoretically driving molecules in solution through a nano-scale …

Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision

GM Cherf, KR Lieberman, H Rashid, CE Lam… - Nature …, 2012 - nature.com
An emerging DNA sequencing technique uses protein or solid-state pores to analyze
individual strands as they are driven in single-file order past a nanoscale sensor,,. However …

Controlling protein translocation through nanopores with bio-inspired fluid walls

EC Yusko, JM Johnson, S Majd, P Prangkio… - Nature …, 2011 - nature.com
Synthetic nanopores have been used to study individual biomolecules in high throughput,
but their performance as sensors does not match that of biological ion channels. Challenges …