The interplay of epigenetic marks during stem cell differentiation and development
Y Atlasi, HG Stunnenberg - Nature Reviews Genetics, 2017 - nature.com
Chromatin, the template for epigenetic regulation, is a highly dynamic entity that is constantly
reshaped during early development and differentiation. Epigenetic modification of chromatin …
reshaped during early development and differentiation. Epigenetic modification of chromatin …
Epigenetic control of CD8+ T cell differentiation
Upon stimulation, small numbers of naive CD8+ T cells proliferate and differentiate into a
variety of memory and effector cell types. CD8+ T cells can persist for years and kill tumour …
variety of memory and effector cell types. CD8+ T cells can persist for years and kill tumour …
A novel FLI1 exonic circular RNA promotes metastasis in breast cancer by coordinately regulating TET1 and DNMT1
N Chen, G Zhao, X Yan, Z Lv, H Yin, S Zhang, W Song… - Genome biology, 2018 - Springer
Background Friend leukemia virus integration 1 (FLI1), an ETS transcription factor family
member, acts as an oncogenic driver in hematological malignancies and promotes tumor …
member, acts as an oncogenic driver in hematological malignancies and promotes tumor …
The three-dimensional organization of mammalian genomes
Animal development depends on not only the linear genome sequence that embeds millions
of cis-regulatory elements, but also the three-dimensional (3D) chromatin architecture that …
of cis-regulatory elements, but also the three-dimensional (3D) chromatin architecture that …
Manipulation of nuclear architecture through CRISPR-mediated chromosomal loo**
SL Morgan, NC Mariano, A Bermudez… - Nature …, 2017 - nature.com
Chromatin loo** is key to gene regulation, yet no broadly applicable methods to
selectively modify chromatin loops have been described. We have engineered a method for …
selectively modify chromatin loops have been described. We have engineered a method for …
The role of chromosome domains in sha** the functional genome
The genome must be highly compacted to fit within eukaryotic nuclei but must be accessible
to the transcriptional machinery to allow appropriate expression of genes in different cell …
to the transcriptional machinery to allow appropriate expression of genes in different cell …
The 3D genome in transcriptional regulation and pluripotency
It can be convenient to think of the genome as simply a string of nucleotides, the linear order
of which encodes an organism's genetic blueprint. However, the genome does not exist as a …
of which encodes an organism's genetic blueprint. However, the genome does not exist as a …
Chromatin dynamics during cellular reprogramming
E Apostolou, K Hochedlinger - Nature, 2013 - nature.com
Induced pluripotency is a powerful tool to derive patient-specific stem cells. In addition, it
provides a unique assay to study the interplay between transcription factors and chromatin …
provides a unique assay to study the interplay between transcription factors and chromatin …
Long noncoding RNAs: an emerging link between gene regulation and nuclear organization
Mammalian genomes encode thousands of long noncoding RNAs (lncRNAs) that play
important roles in diverse biological processes. As a class, lncRNAs are generally enriched …
important roles in diverse biological processes. As a class, lncRNAs are generally enriched …
Ground rules of the pluripotency gene regulatory network
Pluripotency is a state that exists transiently in the early embryo and, remarkably, can be
recapitulated in vitro by deriving embryonic stem cells or by reprogramming somatic cells to …
recapitulated in vitro by deriving embryonic stem cells or by reprogramming somatic cells to …