Microsatellites: simple sequences with complex evolution

H Ellegren - Nature reviews genetics, 2004 - nature.com
Few genetic markers, if any, have found such widespread use as microsatellites, or
simple/short tandem repeats. Features such as hypervariability and ubiquitous occurrence …

Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review

YC Li, AB Korol, T Fahima, A Beiles… - Molecular ecology, 2002 - Wiley Online Library
Microsatellites, or tandem simple sequence repeats (SSR), are abundant across genomes
and show high levels of polymorphism. SSR genetic and evolutionary mechanisms remain …

Microsatellites within genes: structure, function, and evolution

YC Li, AB Korol, T Fahima, E Nevo - Molecular biology and …, 2004 - academic.oup.com
Recently, increasingly more microsatellites, or simple sequence repeats (SSRs) have been
found and characterized within protein-coding genes and their untranslated regions (UTRs) …

Comparative genomics and molecular dynamics of DNA repeats in eukaryotes

GF Richard, A Kerrest, B Dujon - Microbiology and molecular …, 2008 - journals.asm.org
Repeated elements can be widely abundant in eukaryotic genomes, composing more than
50% of the human genome, for example. It is possible to classify repeated sequences into …

Selection against frameshift mutations limits microsatellite expansion in coding DNA

D Metzgar, J Bytof, C Wills - Genome research, 2000 - genome.cshlp.org
Microsatellite enrichment is an excess of repetitive sequences characteristic to all studied
eukaryotes. It is thought to result from the accumulated effects of replication slippage …

Mutational dynamics of microsatellites

A Bhargava, FF Fuentes - Molecular biotechnology, 2010 - Springer
Microsatellites are a ubiquitous class of simple repetitive DNA sequences, which are
widespread in both eukaryotic and prokaryotic genomes. The use of microsatellites as …

An overview of the genome of Nostoc punctiforme, a multicellular, symbiotic cyanobacterium

JC Meeks, J Elhai, T Thiel, M Potts, F Larimer… - Photosynthesis …, 2001 - Springer
Nostoc punctiforme is a filamentous cyanobacterium with extensive phenotypic
characteristics and a relatively large genome, approaching 10 Mb. The phenotypic …

Role of genomic ty** in taxonomy, evolutionary genetics, and microbial epidemiology

A Van Belkum, M Struelens, A de Visser… - Clinical microbiology …, 2001 - journals.asm.org
Currently, genetic ty** of microorganisms is widely used in several major fields of
microbiological research. Taxonomy, research aimed at elucidation of evolutionary …

Simple sequence repeats in Escherichia coli: abundance, distribution, composition, and polymorphism

R Gur-Arie, CJ Cohen, Y Eitan, L Shelef… - Genome …, 2000 - genome.cshlp.org
Computer-based genome-wide screening of the DNA sequence of Escherichia coli strain
K12 revealed tens of thousands of tandem simple sequence repeat (SSR) tracts, with motifs …

The causes of mutation accumulation in mitochondrial genomes

M Neiman, DR Taylor - … of the Royal Society B: Biological …, 2009 - royalsocietypublishing.org
A fundamental observation across eukaryotic taxa is that mitochondrial genomes have a
higher load of deleterious mutations than nuclear genomes. Identifying the evolutionary …