[HTML][HTML] Pseudomonas mediated nutritional and growth promotional activities for sustainable food security

S Sah, S Krishnani, R Singh - Current Research in Microbial Sciences, 2021 - Elsevier
Numerous microbial communities show synergistic and antagonistic interactions among
themselves, resulting in benefit and harm to either or both the associated members. The …

Physico-chemical properties and microbial responses in biochar-amended soils: mechanisms and future directions

S Gul, JK Whalen, BW Thomas, V Sachdeva… - Agriculture, ecosystems & …, 2015 - Elsevier
Soil microbial communities are responsive to biochar amendments. As the residence time of
biochar in soil is expected to be hundreds to thousands of years, the changes in microbial …

Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?

BE Deagle, AC Thomas, JC McInnes… - Molecular …, 2019 - Wiley Online Library
Advances in DNA sequencing technology have revolutionized the field of molecular analysis
of trophic interactions, and it is now possible to recover counts of food DNA sequences from …

Universal and blocking primer mismatches limit the use of high‐throughput DNA sequencing for the quantitative metabarcoding of arthropods

J Piñol, G Mir, P Gomez‐Polo… - Molecular ecology …, 2015 - Wiley Online Library
The quantification of the biological diversity in environmental samples using high‐
throughput DNA sequencing is hindered by the PCR bias caused by variable primer …

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

L Dethlefsen, S Huse, ML Sogin, DA Relman - PLoS biology, 2008 - journals.plos.org
The human intestinal microbiota is essential to the health of the host and plays a role in
nutrition, development, metabolism, pathogen resistance, and regulation of immune …

Evaluation of methods for the extraction and purification of DNA from the human microbiome

S Yuan, DB Cohen, J Ravel, Z Abdo, LJ Forney - PloS one, 2012 - journals.plos.org
Background DNA extraction is an essential step in all cultivation-independent approaches to
characterize microbial diversity, including that associated with the human body. A …

The vaginal microbiome: new information about genital tract flora using molecular based techniques

RF Lamont, JD Sobel, RA Akins… - … Journal of Obstetrics …, 2011 - Wiley Online Library
Please cite this paper as: Lamont R, Sobel J, Akins R, Hassan S, Chaiworapongsa T,
Kusanovic J, Romero R. The vaginal microbiome: new information about genital tract flora …

The role of microorganisms in coral health, disease and evolution

E Rosenberg, O Koren, L Reshef, R Efrony… - Nature Reviews …, 2007 - nature.com
Coral microbiology is an emerging field, driven largely by a desire to understand, and
ultimately prevent, the worldwide destruction of coral reefs. The mucus layer, skeleton and …

Accelerated species inventory on Madagascar using coalescent-based models of species delineation

MT Monaghan, R Wild, M Elliot, T Fujisawa… - Systematic …, 2009 - academic.oup.com
High-throughput DNA sequencing has the potential to accelerate species discovery if it is
able to recognize evolutionary entities from sequence data that are comparable to species …

Use of 16S rRNA and rpoB Genes as Molecular Markers for Microbial Ecology Studies

RJ Case, Y Boucher, I Dahllöf… - Applied and …, 2007 - journals.asm.org
Several characteristics of the 16S rRNA gene, such as its essential function, ubiquity, and
evolutionary properties, have allowed it to become the most commonly used molecular …