The ecological roles of bacterial chemotaxis

JM Keegstra, F Carrara, R Stocker - Nature Reviews Microbiology, 2022 - nature.com
How bacterial chemotaxis is performed is much better understood than why. Traditionally,
chemotaxis has been understood as a foraging strategy by which bacteria enhance their …

[HTML][HTML] Random walks and diffusion on networks

N Masuda, MA Porter, R Lambiotte - Physics reports, 2017 - Elsevier
Random walks are ubiquitous in the sciences, and they are interesting from both theoretical
and practical perspectives. They are one of the most fundamental types of stochastic …

Impact of Xylella fastidiosa subspecies pauca in European olives

K Schneider, W Van der Werf, M Cendoya… - Proceedings of the …, 2020 - pnas.org
Xylella fastidiosa is the causal agent of plant diseases that cause massive economic
damage. In 2013, a strain of the bacterium was, for the first time, detected in the European …

Global nutrient transport in a world of giants

CE Doughty, J Roman, S Faurby, A Wolf… - Proceedings of the …, 2016 - pnas.org
The past was a world of giants, with abundant whales in the sea and large animals roaming
the land. However, that world came to an end following massive late-Quaternary megafauna …

Social-ecological systems as complex adaptive systems: modeling and policy implications

S Levin, T Xepapadeas, AS Crépin… - Environment and …, 2013 - cambridge.org
Systems linking people and nature, known as social-ecological systems, are increasingly
understood as complex adaptive systems. Essential features of these complex adaptive …

Active Brownian particles: From individual to collective stochastic dynamics

P Romanczuk, M Bär, W Ebeling, B Lindner… - The European Physical …, 2012 - Springer
We review theoretical models of individual motility as well as collective dynamics and
pattern formation of active particles. We focus on simple models of active dynamics with a …

The crucial role of the accessible area in ecological niche modeling and species distribution modeling

N Barve, V Barve, A Jiménez-Valverde… - Ecological …, 2011 - Elsevier
Using known occurrences of species and correlational modeling approaches has become a
common paradigm in broad-scale ecology and biogeography, yet important aspects of the …

A movement ecology paradigm for unifying organismal movement research

R Nathan, WM Getz, E Revilla, M Holyoak… - Proceedings of the …, 2008 - pnas.org
Movement of individual organisms is fundamental to life, quilting our planet in a rich tapestry
of phenomena with diverse implications for ecosystems and humans. Movement research is …

Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus

N Kashtan, SE Roggensack, S Rodrigue… - Science, 2014 - science.org
Extensive genomic diversity within coexisting members of a microbial species has been
revealed through selected cultured isolates and metagenomic assemblies. Yet, the cell-by …

Hidden Markov models: Pitfalls and opportunities in ecology

R Glennie, T Adam, V Leos‐Barajas… - Methods in Ecology …, 2023 - Wiley Online Library
Abstract Hidden Markov models (HMMs) and their extensions are attractive methods for
analysing ecological data where noisy, multivariate measurements are made of a hidden …