Inverse electron demand Diels–Alder reactions in chemical biology

BL Oliveira, Z Guo, GJL Bernardes - Chemical Society Reviews, 2017 - pubs.rsc.org
The emerging inverse electron demand Diels–Alder (IEDDA) reaction stands out from other
bioorthogonal reactions by virtue of its unmatchable kinetics, excellent orthogonality and …

Click chemistry in proteomic investigations

CG Parker, MR Pratt - Cell, 2020 - cell.com
Despite advances in genetic and proteomic techniques, a complete portrait of the proteome
and its complement of dynamic interactions and modifications remains a lofty, and as of yet …

Recent advances in activity-based probes (ABPs) and affinity-based probes (A f BPs) for profiling of enzymes

H Fang, B Peng, SY Ong, Q Wu, L Li, SQ Yao - Chemical science, 2021 - pubs.rsc.org
Activity-based protein profiling (ABPP) is a technique that uses highly selective active-site
targeted chemical probes to label and monitor the state of proteins. ABPP integrates the …

Selective small molecule induced degradation of the BET bromodomain protein BRD4

M Zengerle, KH Chan, A Ciulli - ACS chemical biology, 2015 - ACS Publications
The Bromo-and Extra-Terminal (BET) proteins BRD2, BRD3, and BRD4 play important roles
in transcriptional regulation, epigenetics, and cancer and are the targets of pan-BET …

Photoaffinity labelling with small molecules

RA Homan, JD Lapek, CM Woo, S Niessen… - Nature Reviews …, 2024 - nature.com
Small molecules can serve as leads for new therapeutics as well as powerful tools to
investigate biological processes. Understanding the interactions of these molecules …

Photo-affinity labeling (PAL) in chemical proteomics: a handy tool to investigate protein-protein interactions (PPIs)

DP Murale, SC Hong, MM Haque, JS Lee - Proteome Science, 2016 - Springer
Protein-protein interactions (PPIs) trigger a wide range of biological signaling pathways that
are crucial for biomedical research and drug discovery. Various techniques have been used …

Visualizing biologically active small molecules in cells using click chemistry

T Cañeque, S Müller, R Rodriguez - Nature Reviews Chemistry, 2018 - nature.com
Natural products and synthetic small molecules can be used to perturb, dissect and
manipulate biological processes, thereby providing the basis for drug development. Over the …

Fishing for drug targets: a focus on diazirine photoaffinity probe synthesis

JR Hill, AAB Robertson - Journal of medicinal chemistry, 2018 - ACS Publications
Target identification is a high-priority, albeit challenging, aspect of drug discovery. Diazirine-
based photoaffinity probes (PAPs) can facilitate the process by covalently capturing transient …

Small molecule photocatalysis enables drug target identification via energy transfer

AD Trowbridge, CP Seath, FP Rodriguez-Rivera… - Proceedings of the …, 2022 - pnas.org
Over half of new therapeutic approaches fail in clinical trials due to a lack of target validation.
As such, the development of new methods to improve and accelerate the identification of …

Tetrazole photoclick chemistry: reinvestigating its suitability as a bioorthogonal reaction and potential applications

Z Li, L Qian, L Li, JC Bernhammer… - Angewandte Chemie …, 2016 - Wiley Online Library
The bioorthogonality of tetrazole photoclick chemistry has been reassessed. Upon
photolysis of a tetrazole, the highly reactive nitrile imine formed undergoes rapid …