Post-polyploid diploidization and diversification through dysploid changes
T Mandáková, MA Lysak - Current opinion in plant biology, 2018 - Elsevier
Highlights•Post-polyploid diploidization (PPD) in angiosperms usually operates by
descending dysploidy.•PPD is acting with differing intensities and rates.•Multiple base …
descending dysploidy.•PPD is acting with differing intensities and rates.•Multiple base …
Evolution of complex genome architecture in gymnosperms
T Wan, Y Gong, Z Liu, YD Zhou, C Dai, Q Wang - GigaScience, 2022 - academic.oup.com
Gymnosperms represent an ancient lineage that diverged from early spermatophytes during
the Devonian. The long fossil records and low diversity in living species prove their complex …
the Devonian. The long fossil records and low diversity in living species prove their complex …
The western redcedar genome reveals low genetic diversity in a self-compatible conifer
We assembled the 9.8-Gbp genome of western redcedar (WRC; Thuja plicata), an
ecologically and economically important conifer species of the Cupressaceae. The genome …
ecologically and economically important conifer species of the Cupressaceae. The genome …
Performance of genomic prediction within and across generations in maritime pine
Background Genomic selection (GS) is a promising approach for decreasing breeding cycle
length in forest trees. Assessment of progeny performance and of the prediction accuracy of …
length in forest trees. Assessment of progeny performance and of the prediction accuracy of …
Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention
Hybridization and polyploidy followed by genome‐wide diploidization had a significant
impact on the diversification of land plants. The ancient At‐α whole‐genome duplication …
impact on the diversification of land plants. The ancient At‐α whole‐genome duplication …
A chromosome-level genome assembly of a model conifer plant, the Japanese cedar, Cryptomeria japonica D. Don
T Fu**o, K Yamaguchi, TT Yokoyama, T Hamanaka… - BMC genomics, 2024 - Springer
Abstract Background The Japanese cedar (Cryptomeria japonica D. Don) is one of the most
important Japanese forest trees, occupying approximately 44% of artificial forests and …
important Japanese forest trees, occupying approximately 44% of artificial forests and …
The mitogenome of Norway spruce and a reappraisal of mitochondrial recombination in plants
Plant mitogenomes can be difficult to assemble because they are structurally dynamic and
prone to intergenomic DNA transfers, leading to the unusual situation where an organelle …
prone to intergenomic DNA transfers, leading to the unusual situation where an organelle …
High-density linkage map** and distribution of segregation distortion regions in the oak genome
We developed the densest single-nucleotide polymorphism (SNP)-based linkage genetic
map to date for the genus Quercus. An 8k gene-based SNP array was used to genotype …
map to date for the genus Quercus. An 8k gene-based SNP array was used to genotype …
A high‐resolution reference genetic map positioning 8.8 K genes for the conifer white spruce: Structural genomics implications and correspondence with physical …
N Pavy, M Lamothe, B Pelgas, F Gagnon… - The Plant …, 2017 - Wiley Online Library
Over the last decade, extensive genetic and genomic resources have been developed for
the conifer white spruce (Picea glauca, Pinaceae), which has one of the largest plant …
the conifer white spruce (Picea glauca, Pinaceae), which has one of the largest plant …
H Tumas, JJ Ilska, S Gérardi, J Laroche… - G3: Genes …, 2024 - academic.oup.com
In species with large and complex genomes such as conifers, dense linkage maps are a
useful resource for supporting genome assembly and laying the genomic groundwork at the …
useful resource for supporting genome assembly and laying the genomic groundwork at the …