Emerging contaminants: a one health perspective

F Wang, L **ang, KSY Leung, M Elsner, Y Zhang… - The Innovation, 2024 - cell.com
Environmental pollution is escalating due to rapid global development that often prioritizes
human needs over planetary health. Despite global efforts to mitigate legacy pollutants, the …

Metagenomics-enabled microbial surveillance

KKK Ko, KR Chng, N Nagarajan - Nature Microbiology, 2022 - nature.com
Lessons learnt from the COVID-19 pandemic include increased awareness of the potential
for zoonoses and emerging infectious diseases that can adversely affect human health …

Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

P Munk, C Brinch, FD Møller, TN Petersen… - Nature …, 2022 - nature.com
Antimicrobial resistance (AMR) is a major threat to global health. Understanding the
emergence, evolution, and transmission of individual antibiotic resistance genes (ARGs) is …

Identification of antimicrobial peptides from the human gut microbiome using deep learning

Y Ma, Z Guo, B **a, Y Zhang, X Liu, Y Yu, N Tang… - Nature …, 2022 - nature.com
The human gut microbiome encodes a large variety of antimicrobial peptides (AMPs), but
the short lengths of AMPs pose a challenge for computational prediction. Here we combined …

Assessment of global health risk of antibiotic resistance genes

Z Zhang, Q Zhang, T Wang, N Xu, T Lu, W Hong… - Nature …, 2022 - nature.com
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health in
the last decade. Many genes can confer resistance, but evaluating the relative health risks of …

Toward a universal unit for quantification of antibiotic resistance genes in environmental samples

X Yin, X Chen, XT Jiang, Y Yang, B Li… - Environmental …, 2023 - ACS Publications
Surveillance of antibiotic resistance genes (ARGs) has been increasingly conducted in
environmental sectors to complement the surveys in human and animal sectors under the …

[HTML][HTML] ARGs-OAP v3. 0: Antibiotic-resistance gene database curation and analysis pipeline optimization

X Yin, X Zheng, L Li, AN Zhang, XT Jiang, T Zhang - Engineering, 2023 - Elsevier
Antibiotic resistance, which is encoded by antibiotic-resistance genes (ARGs), has
proliferated to become a growing threat to public health around the world. With technical …

MEGARes 2.0: a database for classification of antimicrobial drug, biocide and metal resistance determinants in metagenomic sequence data

E Doster, SM Lakin, CJ Dean, C Wolfe… - Nucleic acids …, 2020 - academic.oup.com
Antimicrobial resistance (AMR) is a threat to global public health and the identification of
genetic determinants of AMR is a critical component to epidemiological investigations. High …

[HTML][HTML] Spread of airborne antibiotic resistance from animal farms to the environment: dispersal pattern and exposure risk

H Bai, LY He, DL Wu, FZ Gao, M Zhang, HY Zou… - Environment …, 2022 - Elsevier
Animal farms have been considered as the critical reservoir of antibiotic resistance genes
(ARGs) and antibiotic resistant bacteria (ARB). Spread of antibiotic resistance from animal …

Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions

D Butler, C Mozsary, C Meydan, J Foox… - Nature …, 2021 - nature.com
In less than nine months, the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-
CoV-2) killed over a million people, including> 25,000 in New York City (NYC) alone. The …