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The Baltimore classification of viruses 50 years later: how does it stand in the light of virus evolution?
SUMMARY Fifty years ago, David Baltimore published a brief conceptual paper delineating
the classification of viruses by the routes of genome expression. The six “Baltimore classes” …
the classification of viruses by the routes of genome expression. The six “Baltimore classes” …
Origin of viruses: primordial replicators recruiting capsids from hosts
Viruses are ubiquitous parasites of cellular life and the most abundant biological entities on
Earth. It is widely accepted that viruses are polyphyletic, but a consensus scenario for their …
Earth. It is widely accepted that viruses are polyphyletic, but a consensus scenario for their …
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
Microbiomes from every environment contain a myriad of uncultivated archaeal and
bacterial viruses, but studying these viruses is hampered by the lack of a universal, scalable …
bacterial viruses, but studying these viruses is hampered by the lack of a universal, scalable …
[HTML][HTML] Marine DNA viral macro-and microdiversity from pole to pole
Microbes drive most ecosystems and are modulated by viruses that impact their lifespan,
gene flow, and metabolic outputs. However, ecosystem-level impacts of viral community …
gene flow, and metabolic outputs. However, ecosystem-level impacts of viral community …
Origins and evolution of the global RNA virome
Viruses with RNA genomes dominate the eukaryotic virome, reaching enormous diversity in
animals and plants. The recent advances of metaviromics prompted us to perform a detailed …
animals and plants. The recent advances of metaviromics prompted us to perform a detailed …
ViPTree: the viral proteomic tree server
Y Nishimura, T Yoshida, M Kuronishi, H Uehara… - …, 2017 - academic.oup.com
ViPTree is a web server provided through GenomeNet to generate viral proteomic trees for
classification of viruses based on genome-wide similarities. Users can upload viral genomes …
classification of viruses based on genome-wide similarities. Users can upload viral genomes …
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes
Bacteriophages from the Inoviridae family (inoviruses) are characterized by their unique
morphology, genome content and infection cycle. One of the most striking features of …
morphology, genome content and infection cycle. One of the most striking features of …
Megataxonomy and global ecology of the virosphere
Nearly all organisms are hosts to multiple viruses that collectively appear to be the most
abundant biological entities in the biosphere. With recent advances in metagenomics and …
abundant biological entities in the biosphere. With recent advances in metagenomics and …
Bacteria have numerous distinctive groups of phage–plasmids with conserved phage and variable plasmid gene repertoires
Plasmids and temperate phages are key contributors to bacterial evolution. They are usually
regarded as very distinct. However, some elements, termed phage–plasmids, are known to …
regarded as very distinct. However, some elements, termed phage–plasmids, are known to …
Multiple origins of viral capsid proteins from cellular ancestors
M Krupovic, EV Koonin - Proceedings of the National Academy of …, 2017 - pnas.org
Viruses are the most abundant biological entities on earth and show remarkable diversity of
genome sequences, replication and expression strategies, and virion structures …
genome sequences, replication and expression strategies, and virion structures …