Molecular mechanisms of RNA targeting by Cas13-containing type VI CRISPR–Cas systems

MR O'Connell - Journal of molecular biology, 2019 - Elsevier
Prokaryotic adaptive immune systems use Clustered Regularly Interspaced Short
Palindromic Repeats (CRISPRs) and CRISPR-associated (Cas) proteins for RNA-guided …

Synergy and regulation of antiphage systems: toward the existence of a bacterial immune system?

F Tesson, A Bernheim - Current Opinion in Microbiology, 2023 - Elsevier
Highlights•Different antiphage systems are encoded in one bacterial genome.•Bacterial
antiphage systems can function in synergy through different strategies.•Antiphage systems …

Cas13d is a compact RNA-targeting type VI CRISPR effector positively modulated by a WYL-domain-containing accessory protein

WX Yan, S Chong, H Zhang, KS Makarova, EV Koonin… - Molecular cell, 2018 - cell.com
Bacterial class 2 CRISPR-Cas systems utilize a single RNA-guided protein effector to
mitigate viral infection. We aggregated genomic data from multiple sources and constructed …

Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system

YA Luyten, DE Hausman, JC Young… - Nucleic acids …, 2022 - academic.oup.com
Abstract Bacteriophage exclusion ('BREX') phage restriction systems are found in a wide
range of bacteria. Various BREX systems encode unique combinations of proteins that …

Control of bacterial immune signaling by a WYL domain transcription factor

CL Blankenchip, JV Nguyen, RK Lau, Q Ye… - Nucleic acids …, 2022 - academic.oup.com
Bacteria use diverse immune systems to defend themselves from ubiquitous viruses termed
bacteriophages (phages). Many anti-phage systems function by abortive infection to kill a …

A widespread family of WYL-domain transcriptional regulators co-localizes with diverse phage defence systems and islands

DM Picton, JD Harling-Lee, SJ Duffner… - Nucleic Acids …, 2022 - academic.oup.com
Bacteria are under constant assault by bacteriophages and other mobile genetic elements.
As a result, bacteria have evolved a multitude of systems that protect from attack. Genes …

A common mechanism for recruiting the Rrm3 and RTEL1 accessory helicases to the eukaryotic replisome

O Olson, S Pelliciari, ED Heron, TD Deegan - The EMBO journal, 2024 - embopress.org
The eukaryotic replisome is assembled around the CMG (CDC45-MCM-GINS) replicative
helicase, which encircles the leading-strand DNA template at replication forks. When CMG …

[HTML][HTML] An emerging class of nucleic acid-sensing regulators in bacteria: WYL domain-containing proteins

LML Keller, E Weber-Ban - Current Opinion in Microbiology, 2023 - Elsevier
Transcriptional regulation plays a central role in adaptation to changing environments for all
living organisms. Recently, proteins belonging to a novel widespread class of bacterial …

Single-stranded DNA binding to the transcription factor PafBC triggers the mycobacterial DNA damage response

CM Schilling, R Zdanowicz, J Rabl, AU Müller… - Science …, 2025 - science.org
The DNA damage response in mycobacteria is controlled by the heterodimeric transcription
factor PafBC, a member of the WYL domain–containing protein family. It has been shown …

ssDNA is an allosteric regulator of the C. crescentus SOS-independent DNA damage response transcription activator, DriD

K Gozzi, R Salinas, VD Nguyen, MT Laub… - Genes & …, 2022 - genesdev.cshlp.org
DNA damage repair systems are critical for genomic integrity. However, they must be
coordinated with DNA replication and cell division to ensure accurate genomic transmission …