Genome sequence and analysis of the tuber crop potato

X Xu, P Pan, S Cheng, B Zhang, D Mu, P Ni, G Zhang… - 2011 - cgspace.cgiar.org
Potato (Solanum tuberosum L.) is the world's most important non-grain food crop and is
central to global food security. It is clonally propagated, highly heterozygous, autotetraploid …

Bridging the gap between genome analysis and precision breeding in potato

C Gebhardt - Trends in Genetics, 2013 - cell.com
Efficiency and precision in plant breeding can be enhanced by using diagnostic DNA-based
markers for the selection of superior cultivars. This technique has been applied to many …

The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives

R Aversano, F Contaldi, MR Ercolano, V Grosso… - The Plant …, 2015 - academic.oup.com
Here, we report the draft genome sequence of Solanum commersonii, which consists of∼
830 megabases with an N50 of 44,303 bp anchored to 12 chromosomes, using the potato …

SHEsisPlus, a toolset for genetic studies on polyploid species

J Shen, Z Li, J Chen, Z Song, Z Zhou, Y Shi - Scientific reports, 2016 - nature.com
Currently, algorithms and softwares for genetic analysis of diploid organisms with bi-allelic
markers are well-established, while those for polyploids are limited. Here, we present …

In silico and computational analysis of zinc finger motif-associated homeodomain (ZF-HD) family genes in chilli (Capsicum annuum L)

MAU Islam, JA Nupur, M Shafiq, Q Ali, A Sami… - BMC genomics, 2023 - Springer
Zinc finger-homeodomain (ZHD) proteins are mostly expressed in plants and are involved in
proper growth and development and minimizing biotic and abiotic stress. A recent study …

Comparative sequence analysis of the potato cyst nematode resistance locus H1 reveals a major lack of co-linearity between three haplotypes in potato (Solanum …

A Finkers-Tomczak, E Bakker, J de Boer… - Theoretical and applied …, 2011 - Springer
The H1 locus confers resistance to the potato cyst nematode Globodera rostochiensis
pathotypes 1 and 4. It is positioned at the distal end of chromosome V of the diploid Solanum …

Sequence exchange between homologous NB-LRR genes converts virus resistance into nematode resistance, and vice versa

E Slootweg, K Koropacka, J Roosien, R Dees… - Plant …, 2017 - academic.oup.com
Plants have evolved a limited repertoire of NB-LRR disease resistance (R) genes to protect
themselves against myriad pathogens. This limitation is thought to be counterbalanced by …

Single Nucleotide Polymorphisms in the Allene Oxide Synthase 2 Gene Are Associated With Field Resistance to Late Blight in Populations of Tetraploid Potato …

K Pajerowska-Mukhtar, B Stich, U Achenbach… - Genetics, 2009 - academic.oup.com
The oomycete Phytophthora infestans causes late blight, the most relevant disease of potato
(Solanum tuberosum) worldwide. Field resistance to late blight is a complex trait. When …

A genome-wide genetic map of NB-LRR disease resistance loci in potato

E Bakker, T Borm, P Prins, E van der Vossen… - Theoretical and Applied …, 2011 - Springer
Like all plants, potato has evolved a surveillance system consisting of a large array of genes
encoding for immune receptors that confer resistance to pathogens and pests. The majority …

The Transcriptome of Compatible and Incompatible Interactions of Potato (Solanum tuberosum) with Phytophthora infestans Revealed by DeepSAGE Analysis

G Gyetvai, M Sønderkær, U Göbel, R Basekow… - PLoS …, 2012 - journals.plos.org
Late blight, caused by the oomycete Phytophthora infestans, is the most important disease of
potato (Solanum tuberosum). Understanding the molecular basis of resistance and …