Raman microspectroscopy for microbiology

KS Lee, Z Landry, FC Pereira, M Wagner… - Nature Reviews …, 2021 - nature.com
Raman microspectroscopy offers microbiologists a rapid and non-destructive technique to
assess the chemical composition of individual live microorganisms in near real time. In this …

NMR and metabolomics—A roadmap for the future

DS Wishart, LL Cheng, V Copié, AS Edison… - Metabolites, 2022 - mdpi.com
Metabolomics investigates global metabolic alterations associated with chemical, biological,
physiological, or pathological processes. These metabolic changes are measured with …

Human gut microbiota from autism spectrum disorder promote behavioral symptoms in mice

G Sharon, NJ Cruz, DW Kang, MJ Gandal, B Wang… - Cell, 2019 - cell.com
Autism spectrum disorder (ASD) manifests as alterations in complex human behaviors
including social communication and stereotypies. In addition to genetic risks, the gut …

A stromal Integrated Stress Response activates perivascular cancer-associated fibroblasts to drive angiogenesis and tumour progression

II Verginadis, H Avgousti, J Monslow, G Skoufos… - Nature cell …, 2022 - nature.com
Bidirectional signalling between the tumour and stroma shapes tumour aggressiveness and
metastasis. ATF4 is a major effector of the Integrated Stress Response, a homeostatic …

MetaboAnalystR 2.0: from raw spectra to biological insights

J Chong, M Yamamoto, J **a - Metabolites, 2019 - mdpi.com
Global metabolomics based on high-resolution liquid chromatography mass spectrometry
(LC-MS) has been increasingly employed in recent large-scale multi-omics studies …

Analytical methods in untargeted metabolomics: state of the art in 2015

A Alonso, S Marsal, A Julià - Frontiers in bioengineering and …, 2015 - frontiersin.org
Metabolomics comprises the methods and techniques that are used to measure the small
molecule composition of biofluids and tissues, and is actually one of the most rapidly …

Metabolite measurement: pitfalls to avoid and practices to follow

W Lu, X Su, MS Klein, IA Lewis, O Fiehn… - Annual review of …, 2017 - annualreviews.org
Metabolites are the small biological molecules involved in energy conversion and
biosynthesis. Studying metabolism is inherently challenging due to metabolites' reactivity …

Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production

GD Wu, C Compher, EZ Chen, SA Smith, RD Shah… - Gut, 2016 - gut.bmj.com
Objective The consumption of an agrarian diet is associated with a reduced risk for many
diseases associated with a 'Westernised'lifestyle. Studies suggest that diet affects the gut …

To fix or not to fix: controls on free-living nitrogen fixation in the rhizosphere

DN Smercina, SE Evans, ML Friesen… - Applied and …, 2019 - Am Soc Microbiol
Free-living nitrogen fixation (FLNF) in the rhizosphere, or N fixation by heterotrophic bacteria
living on/near root surfaces, is ubiquitous and a significant source of N in some terrestrial …

A review on human fecal metabolomics: Methods, applications and the human fecal metabolome database

N Karu, L Deng, M Slae, AC Guo, T Sajed, H Huynh… - Analytica chimica …, 2018 - Elsevier
Metabolomic analysis of human biospecimens had progressed quickly over the past
decade. Technological and methodological advances have led to the comprehensive …