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Practical considerations for measuring the effective reproductive number, Rt
Estimation of the effective reproductive number R t is important for detecting changes in
disease transmission over time. During the Coronavirus Disease 2019 (COVID-19) …
disease transmission over time. During the Coronavirus Disease 2019 (COVID-19) …
[HTML][HTML] Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts
Background: Interventions are now in place worldwide to reduce transmission of the novel
coronavirus. Assessing temporal variations in transmission in different countries is essential …
coronavirus. Assessing temporal variations in transmission in different countries is essential …
Improved inference of time-varying reproduction numbers during infectious disease outbreaks
Accurate estimation of the parameters characterising infectious disease transmission is vital
for optimising control interventions during epidemics. A valuable metric for assessing the …
for optimising control interventions during epidemics. A valuable metric for assessing the …
Swift and extensive Omicron outbreak in China after sudden exit from 'zero-COVID'policy
In late 2022, China transitioned from a strict 'zero-COVID'policy to rapidly abandoning nearly
all interventions and data reporting. This raised great concern about the presumably-rapid …
all interventions and data reporting. This raised great concern about the presumably-rapid …
Transmission dynamics of 2019 novel coronavirus (2019-nCoV)
Background: Since December 29, 2019, pneumonia infection with 2019-nCoV has rapidly
spread out from Wuhan, Hubei Province, China to most others provinces and other counties …
spread out from Wuhan, Hubei Province, China to most others provinces and other counties …
[HTML][HTML] Population immunity predicts evolutionary trajectories of SARS-CoV-2
The large-scale evolution of the SARS-CoV-2 virus has been marked by rapid turnover of
genetic clades. New variants show intrinsic changes, notably increased transmissibility, and …
genetic clades. New variants show intrinsic changes, notably increased transmissibility, and …
The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak
The role of asymptomatic carriers in transmission poses challenges for control of the COVID-
19 pandemic. Study of asymptomatic transmission and implications for surveillance and …
19 pandemic. Study of asymptomatic transmission and implications for surveillance and …
Time-varying transmission dynamics of Novel Coronavirus Pneumonia in China
Rationale Several studies have estimated basic production number of novel coronavirus
pneumonia (NCP). However, the time-varying transmission dynamics of NCP during the …
pneumonia (NCP). However, the time-varying transmission dynamics of NCP during the …
Resilience of countries to COVID-19 correlated with trust
We characterized> 150 countries' resilience to COVID-19 as the nationwide decay rate of
daily cases or deaths from peak levels. Resilience to COVID-19 varies by a factor of~ 40 …
daily cases or deaths from peak levels. Resilience to COVID-19 varies by a factor of~ 40 …
Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) …
A novel coronavirus (SARS-CoV-2) emerged as a global threat in December 2019. As the
epidemic progresses, disease modellers continue to focus on estimating the basic …
epidemic progresses, disease modellers continue to focus on estimating the basic …