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Methods to evaluate bacterial motility and its role in bacterial–host interactions
V Palma, MS Gutiérrez, O Vargas, R Parthasarathy… - Microorganisms, 2022 - mdpi.com
Bacterial motility is a widespread characteristic that can provide several advantages for the
cell, allowing it to move towards more favorable conditions and enabling host-associated …
cell, allowing it to move towards more favorable conditions and enabling host-associated …
Recent advances in experimental design and data analysis to characterize prokaryotic motility
MM Dubay, J Acres, M Riekeles, JL Nadeau - Journal of Microbiological …, 2023 - Elsevier
Bacterial motility plays a key role in important cell processes such as chemotaxis and biofilm
formation, but is challenging to quantify due to the small size of the individual …
formation, but is challenging to quantify due to the small size of the individual …
Predictive local field theory for interacting active Brownian spheres in two spatial dimensions
J Bickmann, R Wittkowski - Journal of Physics: Condensed …, 2020 - iopscience.iop.org
We present a predictive local field theory for the nonequilibrium dynamics of interacting
active Brownian particles with a spherical shape in two spatial dimensions. The theory is …
active Brownian particles with a spherical shape in two spatial dimensions. The theory is …
Collective dynamics of active Brownian particles in three spatial dimensions: a predictive field theory
J Bickmann, R Wittkowski - Physical Review Research, 2020 - APS
We investigate the nonequilibrium dynamics of spherical active Brownian particles in three
spatial dimensions that interact via a pair potential. The investigation is based on a …
spatial dimensions that interact via a pair potential. The investigation is based on a …
Stochastic dynamics of Lagrangian pore‐scale velocities in three‐dimensional porous media
Upscaling dispersion, mixing, and reaction processes from the pore to the Darcy scale is
directly related to the understanding of the dynamics of pore‐scale particle velocities, which …
directly related to the understanding of the dynamics of pore‐scale particle velocities, which …
Retention of graphene oxide and reduced graphene oxide in porous media: Diffusion-attachment, interception-attachment and straining
J Song, Y Zeng, Y Liu, W Jiang - Journal of Hazardous Materials, 2022 - Elsevier
The aggregation, deposition and retention of graphene oxide (GO) and reduced graphene
oxide (RGO) were investigated systematically to estimate their mobility in the environment …
oxide (RGO) were investigated systematically to estimate their mobility in the environment …
Sequential epidemic-like spread between agglomerates of self-propelled agents in one dimension
Motile organisms can form stable agglomerates such as cities or colonies. In the outbreak of
a highly contagious disease, the control of large-scale epidemic spread depends on factors …
a highly contagious disease, the control of large-scale epidemic spread depends on factors …
Impact of confined geometries on hop** and trap** of motile bacteria in porous media
We use a random walk particle-tracking (RWPT) approach to elucidate the impact of porous
media confinement and cell-cell interactions on bacterial transport. The model employs …
media confinement and cell-cell interactions on bacterial transport. The model employs …
On modeling ensemble transport of metal reducing motile bacteria
Many metal reducing bacteria are motile with their run-and-tumble behavior exhibiting series
of flights and waiting-time spanning multiple orders of magnitude. While several models of …
of flights and waiting-time spanning multiple orders of magnitude. While several models of …
Sequential epidemic spread between agglomerates of self-propelled agents in one dimension
P de Castro, F Urbina, A Norambuena… - arxiv preprint arxiv …, 2023 - arxiv.org
Motile organisms can form stable agglomerates such as cities or colonies. In the outbreak of
a highly contagious disease, the control of large-scale epidemic spread depends on factors …
a highly contagious disease, the control of large-scale epidemic spread depends on factors …